Protein–RNA interactions for Protein: Q07953

SDO1, Ribosome maturation protein SDO1, yeastyeast

Known RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDO1Q07953 PEX3YDR329C 1326 nt5.5□□□□□ -1.53
SDO1Q07953 VPS5YOR069W 2028 nt5.5□□□□□ -1.53
SDO1Q07953 DOC1YGL240W 753 nt5.5□□□□□ -1.53
SDO1Q07953 AIM24YJR080C 1185 nt5.5□□□□□ -1.53
SDO1Q07953 COX17YLL009C 210 nt5.5□□□□□ -1.53
SDO1Q07953 UTP9YHR196W 1728 nt5.5□□□□□ -1.53
SDO1Q07953 CLB2YPR119W 1476 nt5.5□□□□□ -1.53
SDO1Q07953 HED1YDR014W-A 489 nt5.49□□□□□ -1.53
SDO1Q07953 MRP1YDR347W 966 nt5.49□□□□□ -1.53
SDO1Q07953 YDR396WYDR396W 501 nt5.49□□□□□ -1.53
SDO1Q07953 YDR401WYDR401W 564 nt5.49□□□□□ -1.53
SDO1Q07953 EFM3YJR129C 1020 nt5.49□□□□□ -1.53
SDO1Q07953 COQ3YOL096C 939 nt5.49□□□□□ -1.53
SDO1Q07953 YPR123CYPR123C 435 nt5.49□□□□□ -1.53
SDO1Q07953 SMX3YPR182W 261 nt5.49□□□□□ -1.53
SDO1Q07953 YHL017WYHL017W 1599 nt5.49□□□□□ -1.53
SDO1Q07953 VBA1YMR088C 1689 nt5.49□□□□□ -1.53
SDO1Q07953 SEC18YBR080C 2277 nt5.48□□□□□ -1.53
SDO1Q07953 ATG7YHR171W 1893 nt5.48□□□□□ -1.53
SDO1Q07953 TMA46YOR091W 1038 nt5.48□□□□□ -1.53
SDO1Q07953 KDX1YKL161C 1302 nt5.48□□□□□ -1.53
SDO1Q07953 PRP24YMR268C 1335 nt5.48□□□□□ -1.53
SDO1Q07953 SIT1YEL065W 1887 nt5.47□□□□□ -1.53
SDO1Q07953 NOP2YNL061W 1857 nt5.47□□□□□ -1.53
SDO1Q07953 SPG1YGR236C 288 nt5.47□□□□□ -1.53
SDO1Q07953 COA1YIL157C 594 nt5.47□□□□□ -1.53
SDO1Q07953 GET4YOR164C 939 nt5.47□□□□□ -1.53
SDO1Q07953 BNA5YLR231C 1362 nt5.46□□□□□ -1.54
SDO1Q07953 YMR155WYMR155W 1644 nt5.46□□□□□ -1.54
SDO1Q07953 MPM1YJL066C 759 nt5.46□□□□□ -1.54
SDO1Q07953 OGG1YML060W 1131 nt5.46□□□□□ -1.54
SDO1Q07953 RIB1YBL033C 1038 nt5.46□□□□□ -1.54
SDO1Q07953 YNR005CYNR005C 405 nt5.46□□□□□ -1.54
SDO1Q07953 GPB2YAL056W 2643 nt5.46□□□□□ -1.54
SDO1Q07953 PDR18YNR070W 4002 nt5.46□□□□□ -1.54
SDO1Q07953 COQ1YBR003W 1422 nt5.46□□□□□ -1.54
SDO1Q07953 YGL102CYGL102C 429 nt5.45□□□□□ -1.54
SDO1Q07953 TIF2YJL138C 1188 nt5.45□□□□□ -1.54
SDO1Q07953 TIF1YKR059W 1188 nt5.45□□□□□ -1.54
SDO1Q07953 RFC4YOL094C 972 nt5.45□□□□□ -1.54
SDO1Q07953 OST3YOR085W 1053 nt5.45□□□□□ -1.54
SDO1Q07953 VPS4YPR173C 1314 nt5.45□□□□□ -1.54
SDO1Q07953 MCM6YGL201C 3054 nt5.44□□□□□ -1.54
SDO1Q07953 PTK2YJR059W 2457 nt5.44□□□□□ -1.54
SDO1Q07953 YJR146WYJR146W 354 nt5.44□□□□□ -1.54
SDO1Q07953 PSR2YLR019W 1194 nt5.44□□□□□ -1.54
SDO1Q07953 SEC17YBL050W 879 nt5.44□□□□□ -1.54
SDO1Q07953 YPR130CYPR130C 408 nt5.44□□□□□ -1.54
SDO1Q07953 AMA1YGR225W 1782 nt5.44□□□□□ -1.54
SDO1Q07953 YFL042CYFL042C 2025 nt5.43□□□□□ -1.54
SDO1Q07953 DRS1YLL008W 2259 nt5.43□□□□□ -1.54
SDO1Q07953 COX20YDR231C 618 nt5.43□□□□□ -1.54
SDO1Q07953 MRS1YIR021W 1092 nt5.43□□□□□ -1.54
SDO1Q07953 QCR8YJL166W 285 nt5.43□□□□□ -1.54
SDO1Q07953 YML083CYML083C 1257 nt5.43□□□□□ -1.54
SDO1Q07953 SEC62YPL094C 825 nt5.43□□□□□ -1.54
SDO1Q07953 PDB1YBR221C 1101 nt5.43□□□□□ -1.54
SDO1Q07953 ALD6YPL061W 1503 nt5.43□□□□□ -1.54
SDO1Q07953 FOB1YDR110W 1701 nt5.43□□□□□ -1.54
SDO1Q07953 CCZ1YBR131W 2115 nt5.42□□□□□ -1.54
SDO1Q07953 DML1YMR211W 1428 nt5.42□□□□□ -1.54
SDO1Q07953 tL(UAA)B1tL(UAA)B1 84 nt5.42□□□□□ -1.54
SDO1Q07953 tL(UAA)B2tL(UAA)B2 84 nt5.42□□□□□ -1.54
SDO1Q07953 tL(UAA)DtL(UAA)D 84 nt5.42□□□□□ -1.54
SDO1Q07953 SUP51tL(UAA)J 84 nt5.42□□□□□ -1.54
SDO1Q07953 tL(UAA)KtL(UAA)K 84 nt5.42□□□□□ -1.54
SDO1Q07953 tL(UAA)LtL(UAA)L 84 nt5.42□□□□□ -1.54
SDO1Q07953 tL(UAA)NtL(UAA)N 84 nt5.42□□□□□ -1.54
SDO1Q07953 PRI1YIR008C 1230 nt5.42□□□□□ -1.54
SDO1Q07953 YIR042CYIR042C 711 nt5.42□□□□□ -1.54
SDO1Q07953 APN1YKL114C 1104 nt5.42□□□□□ -1.54
SDO1Q07953 RHO4YKR055W 876 nt5.42□□□□□ -1.54
SDO1Q07953 ENP1YBR247C 1452 nt5.42□□□□□ -1.54
SDO1Q07953 HRQ1YDR291W 3234 nt5.41□□□□□ -1.54
SDO1Q07953 VPS72YDR485C 2388 nt5.41□□□□□ -1.54
SDO1Q07953 FUS3YBL016W 1062 nt5.41□□□□□ -1.54
SDO1Q07953 HTZ1YOL012C 405 nt5.41□□□□□ -1.54
SDO1Q07953 HSP104YLL026W 2727 nt5.4□□□□□ -1.54
SDO1Q07953 CIA1YDR267C 993 nt5.4□□□□□ -1.54
SDO1Q07953 YDR278CYDR278C 318 nt5.4□□□□□ -1.54
SDO1Q07953 SOD2YHR008C 702 nt5.4□□□□□ -1.54
SDO1Q07953 IES2YNL215W 963 nt5.4□□□□□ -1.54
SDO1Q07953 NHP6BYBR089C-A 300 nt5.4□□□□□ -1.54
SDO1Q07953 RBA50YDR527W 1320 nt5.4□□□□□ -1.55
SDO1Q07953 COX10YPL172C 1389 nt5.4□□□□□ -1.55
SDO1Q07953 VPS1YKR001C 2115 nt5.39□□□□□ -1.55
SDO1Q07953 PGK1YCR012W 1251 nt5.39□□□□□ -1.55
SDO1Q07953 VAM7YGL212W 951 nt5.39□□□□□ -1.55
SDO1Q07953 YGR176WYGR176W 348 nt5.39□□□□□ -1.55
SDO1Q07953 MRPL19YNL185C 477 nt5.39□□□□□ -1.55
SDO1Q07953 YTH1YPR107C 627 nt5.39□□□□□ -1.55
SDO1Q07953 IES1YFL013C 2079 nt5.39□□□□□ -1.55
SDO1Q07953 UME1YPL139C 1383 nt5.39□□□□□ -1.55
SDO1Q07953 LAT1YNL071W 1449 nt5.39□□□□□ -1.55
SDO1Q07953 HOS1YPR068C 1413 nt5.39□□□□□ -1.55
SDO1Q07953 DOT1YDR440W 1749 nt5.38□□□□□ -1.55
SDO1Q07953 MRPL10YNL284C 969 nt5.38□□□□□ -1.55
SDO1Q07953 YOL163WYOL163W 510 nt5.38□□□□□ -1.55
SDO1Q07953 VTH1YIL173W 4650 nt5.38□□□□□ -1.55
SDO1Q07953 VTH2YJL222W 4650 nt5.38□□□□□ -1.55
Retrieved 100 of 7,029 protein–RNA pairs in 7.5 ms