RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeastyeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC18YBR080C DRS1P32892 752 aaKnown RBP11.94□□□□□ -0.5
SEC18YBR080C TFA1P36100 482 aa11.29□□□□□ -0.6
SEC18YBR080C BFR2Q06631 534 aaKnown RBP10.87□□□□□ -0.67
SEC18YBR080C MTC1P47018 478 aaKnown RBP10.63□□□□□ -0.71
SEC18YBR080C RQC2Q12532 1038 aaKnown RBP10.56□□□□□ -0.72
SEC18YBR080C TAF7Q05021 590 aa10.51□□□□□ -0.73
SEC18YBR080C AVT3P36062 692 aa10.14□□□□□ -0.79
SEC18YBR080C DMA1P38823 416 aa9.8□□□□□ -0.84
SEC18YBR080C DIP2Q12220 943 aaPredicted RBP9.75□□□□□ -0.85
SEC18YBR080C LEO1P38439 464 aa9.63□□□□□ -0.87
SEC18YBR080C LEU3P08638 886 aa9.07□□□□□ -0.96
SEC18YBR080C ABP1P15891 592 aaKnown RBP9.06□□□□□ -0.96
SEC18YBR080C SAS10Q12136 610 aaPredicted RBP8.95□□□□□ -0.98
SEC18YBR080C IFH1P39520 1085 aa8.91□□□□□ -0.98
SEC18YBR080C PTP3P40048 928 aa8.91□□□□□ -0.98
SEC18YBR080C DMA2P53924 522 aa8.9□□□□□ -0.98
SEC18YBR080C IOC4Q04213 475 aa8.78□□□□□ -1
SEC18YBR080C NAP1P25293 417 aaKnown RBP8.75□□□□□ -1.01
SEC18YBR080C RSE1Q04693 1361 aaKnown RBP8.73□□□□□ -1.01
SEC18YBR080C ORC1P54784 914 aaPredicted RBP8.73□□□□□ -1.01
SEC18YBR080C RLF2Q12495 606 aa8.66□□□□□ -1.02
SEC18YBR080C RPN1P38764 993 aaKnown RBP8.6□□□□□ -1.03
SEC18YBR080C SSP1P38871 571 aa8.6□□□□□ -1.03
SEC18YBR080C AIM44Q99299 758 aa8.5□□□□□ -1.05
SEC18YBR080C RIM101P33400 625 aa8.49□□□□□ -1.05
SEC18YBR080C URN1Q06525 465 aaKnown RBP8.46□□□□□ -1.06
SEC18YBR080C CKB1P43639 278 aa8.44□□□□□ -1.06
SEC18YBR080C NOP8Q08287 484 aaPredicted RBP8.38□□□□□ -1.07
SEC18YBR080C SPT21P35209 758 aa8.38□□□□□ -1.07
SEC18YBR080C RPL17AP05740 184 aaKnown RBP8.35□□□□□ -1.07
SEC18YBR080C RPL17BP46990 184 aaKnown RBP8.35□□□□□ -1.07
SEC18YBR080C YML020WQ03722 664 aa8.34□□□□□ -1.07
SEC18YBR080C OXP1P28273 1286 aa8.32□□□□□ -1.08
SEC18YBR080C YLR271WQ06152 274 aa8.3□□□□□ -1.08
SEC18YBR080C ISW2Q08773 1120 aa8.17□□□□□ -1.1
SEC18YBR080C YAH1Q12184 172 aaKnown RBP8.17□□□□□ -1.1
SEC18YBR080C MGA2P40578 1113 aa8.17□□□□□ -1.1
SEC18YBR080C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.16□□□□□ -1.1not detected
SEC18YBR080C YPR148CQ06523 435 aa8.15□□□□□ -1.1
SEC18YBR080C SLX8P40072 274 aa8.15□□□□□ -1.1
SEC18YBR080C RPG1P38249 964 aaKnown RBP8.14□□□□□ -1.11
SEC18YBR080C SPB4P25808 606 aaPredicted RBP8.14□□□□□ -1.11
SEC18YBR080C CST9Q06032 482 aa8.14□□□□□ -1.11
SEC18YBR080C KIN1P13185 1064 aa8.13□□□□□ -1.11
SEC18YBR080C TOP1P04786 769 aa8.11□□□□□ -1.11
SEC18YBR080C MAM3Q12296 706 aa8.1□□□□□ -1.11
SEC18YBR080C DSF2P38213 736 aa8.08□□□□□ -1.12
SEC18YBR080C MRX12P47084 519 aa8.08□□□□□ -1.12
SEC18YBR080C SNU71P53207 620 aaKnown RBP8.08□□□□□ -1.12
SEC18YBR080C ATG36P46983 293 aa8.07□□□□□ -1.12
SEC18YBR080C GEF1P37020 779 aa8.05□□□□□ -1.12
SEC18YBR080C SUB2Q07478 446 aaKnown RBP8.04□□□□□ -1.12
SEC18YBR080C VPS70P47161 811 aa8.04□□□□□ -1.12
SEC18YBR080C REB1P21538 810 aa8.03□□□□□ -1.12
SEC18YBR080C GUA1P38625 525 aaKnown RBP8.03□□□□□ -1.12
SEC18YBR080C SSA1P10591 642 aaKnown RBP8.03□□□□□ -1.12
SEC18YBR080C SET1P38827 1080 aaKnown RBP8.02□□□□□ -1.13
SEC18YBR080C YNR021WP53723 404 aaKnown RBP8.02□□□□□ -1.13
SEC18YBR080C PAM1P37304 830 aaKnown RBP8.01□□□□□ -1.13
SEC18YBR080C RAM2P29703 316 aa8□□□□□ -1.13
SEC18YBR080C YRB30P53107 440 aaPredicted RBP7.99□□□□□ -1.13
SEC18YBR080C AIM7Q12156 149 aa7.96□□□□□ -1.13
SEC18YBR080C GLC3P32775 704 aa7.96□□□□□ -1.14
SEC18YBR080C LAM6Q08001 693 aa7.95□□□□□ -1.14
SEC18YBR080C SWE1P32944 819 aa7.94□□□□□ -1.14
SEC18YBR080C PSD2P53037 1138 aaKnown RBP7.94□□□□□ -1.14
SEC18YBR080C NOP7P53261 605 aaKnown RBP7.93□□□□□ -1.14
SEC18YBR080C PBS2P08018 668 aa7.91□□□□□ -1.14
SEC18YBR080C FAR11P53917 953 aa7.91□□□□□ -1.14
SEC18YBR080C BRL1P38770 471 aa7.91□□□□□ -1.14
SEC18YBR080C SPC42P36094 363 aa7.9□□□□□ -1.15
SEC18YBR080C RSM7P47150 247 aa7.89□□□□□ -1.15
SEC18YBR080C NUP42P49686 430 aaKnown RBP7.89□□□□□ -1.15
SEC18YBR080C YIL055CP40523 627 aaKnown RBP7.89□□□□□ -1.15
SEC18YBR080C DIT2P21595 489 aa7.87□□□□□ -1.15
SEC18YBR080C SEN54Q02825 467 aaPredicted RBP7.87□□□□□ -1.15
SEC18YBR080C YTA7P40340 1379 aa7.87□□□□□ -1.15
SEC18YBR080C HGH1P48362 394 aaKnown RBP7.86□□□□□ -1.15
SEC18YBR080C HPC2Q01448 625 aa7.86□□□□□ -1.15
SEC18YBR080C DOS2P54858 310 aa7.86□□□□□ -1.15
SEC18YBR080C OCA5P38738 679 aa7.85□□□□□ -1.15
SEC18YBR080C TFB3Q03290 321 aa7.85□□□□□ -1.15
SEC18YBR080C GLN1P32288 370 aaKnown RBP7.84□□□□□ -1.15
SEC18YBR080C RRN6P32786 894 aa7.84□□□□□ -1.15
SEC18YBR080C NUG1P40010 520 aaKnown RBP7.83□□□□□ -1.16
SEC18YBR080C PKC1P24583 1151 aa7.83□□□□□ -1.16
SEC18YBR080C MET10P39692 1035 aa7.82□□□□□ -1.16
SEC18YBR080C PRI1P10363 409 aa7.81□□□□□ -1.16
SEC18YBR080C BRN1P38170 754 aa7.81□□□□□ -1.16
SEC18YBR080C YKR023WP36119 530 aaKnown RBP7.8□□□□□ -1.16
SEC18YBR080C RCR1P38212 213 aa7.79□□□□□ -1.16
SEC18YBR080C IES2P40154 320 aa7.77□□□□□ -1.17
SEC18YBR080C TPO2P53283 614 aa7.77□□□□□ -1.17
SEC18YBR080C SSF1P38789 453 aaPredicted RBP7.76□□□□□ -1.17
SEC18YBR080C ATG32P40458 529 aa7.75□□□□□ -1.17
SEC18YBR080C BIM1P40013 344 aa7.74□□□□□ -1.17
SEC18YBR080C NOB1Q08444 459 aaKnown RBP7.74□□□□□ -1.17
SEC18YBR080C JSN1P47135 1091 aaKnown RBP RIP-Chip data7.73□□□□□ -1.17not detected
SEC18YBR080C YJR008WP47085 338 aa7.72□□□□□ -1.17
SEC18YBR080C HEM3P28789 327 aa7.71□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms