RNA–Protein interactions for RNA: YNR070W

PDR18, Transcript of Putative transporter of the ATP-binding cassette (ABC) family, yeastyeast

Gene PDR18, Length 4,002 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDR18YNR070W DRS1P32892 752 aaKnown RBP9.2□□□□□ -0.94
PDR18YNR070W MTC1P47018 478 aaKnown RBP9.07□□□□□ -0.96
PDR18YNR070W RQC2Q12532 1038 aaKnown RBP9.03□□□□□ -0.96
PDR18YNR070W SGS1P35187 1447 aa8.93□□□□□ -0.98
PDR18YNR070W SAS10Q12136 610 aaPredicted RBP8.89□□□□□ -0.99
PDR18YNR070W INO80P53115 1489 aa8.79□□□□□ -1
PDR18YNR070W SPA2P23201 1466 aaKnown RBP8.79□□□□□ -1
PDR18YNR070W IFH1P39520 1085 aa8.58□□□□□ -1.04
PDR18YNR070W TAF2P23255 1407 aa8.57□□□□□ -1.04
PDR18YNR070W RTT106P40161 455 aa8.44□□□□□ -1.06
PDR18YNR070W TAF7Q05021 590 aa8.44□□□□□ -1.06
PDR18YNR070W TFA1P36100 482 aa8.42□□□□□ -1.06
PDR18YNR070W SKI3P17883 1432 aaKnown RBP8.34□□□□□ -1.07
PDR18YNR070W RSE1Q04693 1361 aaKnown RBP8.34□□□□□ -1.07
PDR18YNR070W SSN2P38931 1420 aa8.32□□□□□ -1.08
PDR18YNR070W ORC1P54784 914 aaPredicted RBP8.26□□□□□ -1.09
PDR18YNR070W TCB3Q03640 1545 aaKnown RBP8.26□□□□□ -1.09
PDR18YNR070W CKB1P43639 278 aa8.26□□□□□ -1.09
PDR18YNR070W LEU3P08638 886 aa8.23□□□□□ -1.09
PDR18YNR070W PAF1P38351 445 aa8.23□□□□□ -1.09
PDR18YNR070W NOP7P53261 605 aaKnown RBP8.23□□□□□ -1.09
PDR18YNR070W SPT6P23615 1451 aaKnown RBP8.17□□□□□ -1.1
PDR18YNR070W XRN1P22147 1528 aaKnown RBP8.12□□□□□ -1.11
PDR18YNR070W POL5P39985 1022 aaKnown RBP8.11□□□□□ -1.11
PDR18YNR070W ECM5Q03214 1411 aa8.07□□□□□ -1.12
PDR18YNR070W BUD21Q08492 214 aaPredicted RBP8.06□□□□□ -1.12
PDR18YNR070W STH1P32597 1359 aa8.05□□□□□ -1.12
PDR18YNR070W NAP1P25293 417 aaKnown RBP8.02□□□□□ -1.13
PDR18YNR070W SCT1P32784 759 aa7.98□□□□□ -1.13
PDR18YNR070W BUD4P47136 1447 aa7.97□□□□□ -1.13
PDR18YNR070W YTA7P40340 1379 aa7.96□□□□□ -1.13
PDR18YNR070W FPR3P38911 411 aaKnown RBP7.92□□□□□ -1.14
PDR18YNR070W DNA2P38859 1522 aa7.88□□□□□ -1.15
PDR18YNR070W HSL1P34244 1518 aa7.86□□□□□ -1.15
PDR18YNR070W MRX12P47084 519 aa7.84□□□□□ -1.15
PDR18YNR070W KOG1P38873 1557 aa7.82□□□□□ -1.16
PDR18YNR070W PAN1P32521 1480 aa7.81□□□□□ -1.16
PDR18YNR070W URN1Q06525 465 aaKnown RBP7.81□□□□□ -1.16
PDR18YNR070W MET10P39692 1035 aa7.8□□□□□ -1.16
PDR18YNR070W SMC4Q12267 1418 aa7.79□□□□□ -1.16
PDR18YNR070W PAP2P53632 584 aaKnown RBP7.79□□□□□ -1.16
PDR18YNR070W STU1P38198 1513 aa7.78□□□□□ -1.16
PDR18YNR070W SWR1Q05471 1514 aa7.78□□□□□ -1.16
PDR18YNR070W ABP1P15891 592 aaKnown RBP7.78□□□□□ -1.16
PDR18YNR070W TAF5P38129 798 aa7.78□□□□□ -1.16
PDR18YNR070W NOP2P40991 618 aaKnown RBP7.76□□□□□ -1.17
PDR18YNR070W BFR2Q06631 534 aaKnown RBP7.76□□□□□ -1.17
PDR18YNR070W TRM732Q03496 1420 aa7.73□□□□□ -1.17
PDR18YNR070W REV3P14284 1504 aa7.72□□□□□ -1.17
PDR18YNR070W UFD4P33202 1483 aa7.71□□□□□ -1.18
PDR18YNR070W HIR3P47171 1648 aa7.71□□□□□ -1.18
PDR18YNR070W KIP3P53086 805 aaKnown RBP7.7□□□□□ -1.18
PDR18YNR070W ENP1P38333 483 aaKnown RBP7.7□□□□□ -1.18
PDR18YNR070W MNN4P36044 1178 aa7.69□□□□□ -1.18
PDR18YNR070W IKI3Q06706 1349 aaKnown RBP7.69□□□□□ -1.18
PDR18YNR070W CHD1P32657 1468 aa7.66□□□□□ -1.18
PDR18YNR070W MON2P48563 1636 aaPredicted RBP7.65□□□□□ -1.19
PDR18YNR070W SEC3P33332 1336 aaKnown RBP7.64□□□□□ -1.19
PDR18YNR070W PDS5Q04264 1277 aa7.64□□□□□ -1.19
PDR18YNR070W ESL2P36168 1195 aa7.62□□□□□ -1.19
PDR18YNR070W FUN12P39730 1002 aaKnown RBP7.61□□□□□ -1.19
PDR18YNR070W EAF7P53911 425 aaKnown RBP7.61□□□□□ -1.19
PDR18YNR070W KAR2P16474 682 aaKnown RBP7.6□□□□□ -1.19
PDR18YNR070W NOP8Q08287 484 aaPredicted RBP7.6□□□□□ -1.19
PDR18YNR070W KRI1P42846 591 aaKnown RBP7.59□□□□□ -1.19
PDR18YNR070W SPT7P35177 1332 aa7.59□□□□□ -1.19
PDR18YNR070W CHZ1P40019 153 aaPredicted RBP7.59□□□□□ -1.19
PDR18YNR070W MMS22Q06164 1454 aa7.58□□□□□ -1.2
PDR18YNR070W RTF1P53064 558 aa7.57□□□□□ -1.2
PDR18YNR070W SIS2P36024 562 aa7.57□□□□□ -1.2
PDR18YNR070W TAF8Q03750 510 aa7.57□□□□□ -1.2
PDR18YNR070W SPE2P21182 396 aa7.56□□□□□ -1.2
PDR18YNR070W RIA1P53893 1110 aa7.56□□□□□ -1.2
PDR18YNR070W MYO2P19524 1574 aaKnown RBP7.55□□□□□ -1.2
PDR18YNR070W PSD2P53037 1138 aaKnown RBP7.55□□□□□ -1.2
PDR18YNR070W NSR1P27476 414 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
PDR18YNR070W GEA1P47102 1408 aaPredicted RBP7.54□□□□□ -1.2
PDR18YNR070W NUP157P40064 1391 aaKnown RBP7.54□□□□□ -1.2
PDR18YNR070W SPP41P38904 1435 aa7.53□□□□□ -1.2
PDR18YNR070W MDS3P53094 1487 aa7.53□□□□□ -1.2
PDR18YNR070W SSM4P40318 1319 aa7.51□□□□□ -1.21
PDR18YNR070W RTR1P40084 226 aaPredicted RBP7.5□□□□□ -1.21
PDR18YNR070W RAD2P07276 1031 aa7.5□□□□□ -1.21
PDR18YNR070W SCC2Q04002 1493 aa7.5□□□□□ -1.21
PDR18YNR070W YRB30P53107 440 aaPredicted RBP7.49□□□□□ -1.21
PDR18YNR070W YBR287WP38355 427 aa7.49□□□□□ -1.21
PDR18YNR070W CAB1Q04430 367 aa7.49□□□□□ -1.21
PDR18YNR070W BNR1P40450 1375 aa7.48□□□□□ -1.21
PDR18YNR070W THO2P53552 1597 aaKnown RBP7.48□□□□□ -1.21
PDR18YNR070W TOP2P06786 1428 aaKnown RBP7.48□□□□□ -1.21
PDR18YNR070W CSE4P36012 229 aa7.48□□□□□ -1.21
PDR18YNR070W YFR016CP43597 1233 aaKnown RBP7.48□□□□□ -1.21
PDR18YNR070W YJL181WP46987 611 aa7.46□□□□□ -1.21
PDR18YNR070W YDL144CQ07589 356 aa7.46□□□□□ -1.21
PDR18YNR070W TSC11P40061 1430 aa7.46□□□□□ -1.22
PDR18YNR070W DRS2P39524 1355 aa7.46□□□□□ -1.22
PDR18YNR070W TY1B-DR4Q07793 1604 aa7.45□□□□□ -1.22
PDR18YNR070W YGL081WP53156 320 aa7.44□□□□□ -1.22
PDR18YNR070W RKR1Q04781 1562 aa7.44□□□□□ -1.22
PDR18YNR070W BPT1P14772 1559 aa7.44□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms