RNA–Protein interactions for RNA: YIL173W

VTH1, Transcript of Putative membrane glycoprotein, yeastyeast

Gene VTH1, Length 4,650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTH1YIL173W TFA1P36100 482 aa7.8□□□□□ -1.16
VTH1YIL173W DRS1P32892 752 aaKnown RBP7.79□□□□□ -1.16
VTH1YIL173W TAF7Q05021 590 aa7.7□□□□□ -1.18
VTH1YIL173W RQC2Q12532 1038 aaKnown RBP7.66□□□□□ -1.18
VTH1YIL173W MNN4P36044 1178 aa7.64□□□□□ -1.19
VTH1YIL173W MTC1P47018 478 aaKnown RBP7.62□□□□□ -1.19
VTH1YIL173W SAS10Q12136 610 aaPredicted RBP7.58□□□□□ -1.2
VTH1YIL173W SCT1P32784 759 aa7.43□□□□□ -1.22
VTH1YIL173W FPR3P38911 411 aaKnown RBP7.34□□□□□ -1.23
VTH1YIL173W IFH1P39520 1085 aa7.31□□□□□ -1.24
VTH1YIL173W PAF1P38351 445 aa7.3□□□□□ -1.24
VTH1YIL173W NOP7P53261 605 aaKnown RBP7.25□□□□□ -1.25
VTH1YIL173W RTT106P40161 455 aa7.22□□□□□ -1.25
VTH1YIL173W NAP1P25293 417 aaKnown RBP7.21□□□□□ -1.26
VTH1YIL173W SPA2P23201 1466 aaKnown RBP7.2□□□□□ -1.26
VTH1YIL173W POL5P39985 1022 aaKnown RBP7.2□□□□□ -1.26
VTH1YIL173W SGS1P35187 1447 aa7.18□□□□□ -1.26
VTH1YIL173W LEU3P08638 886 aa7.18□□□□□ -1.26
VTH1YIL173W AIM44Q99299 758 aa7.17□□□□□ -1.26
VTH1YIL173W EAF7P53911 425 aaKnown RBP7.15□□□□□ -1.26
VTH1YIL173W NOP2P40991 618 aaKnown RBP7.13□□□□□ -1.27
VTH1YIL173W ORC1P54784 914 aaPredicted RBP7.11□□□□□ -1.27
VTH1YIL173W SIS2P36024 562 aa7.09□□□□□ -1.27
VTH1YIL173W ASF1P32447 279 aa7.03□□□□□ -1.28
VTH1YIL173W CAB3P36076 571 aa7□□□□□ -1.29
VTH1YIL173W CKB1P43639 278 aa7□□□□□ -1.29
VTH1YIL173W TAF2P23255 1407 aa6.95□□□□□ -1.3
VTH1YIL173W INO80P53115 1489 aa6.95□□□□□ -1.3
VTH1YIL173W COG8Q04632 607 aa6.89□□□□□ -1.31
VTH1YIL173W BUD21Q08492 214 aaPredicted RBP6.89□□□□□ -1.31
VTH1YIL173W KRI1P42846 591 aaKnown RBP6.89□□□□□ -1.31
VTH1YIL173W RNA1P11745 407 aaKnown RBP6.88□□□□□ -1.31
VTH1YIL173W LEO1P38439 464 aa6.87□□□□□ -1.31
VTH1YIL173W ENP1P38333 483 aaKnown RBP6.86□□□□□ -1.31
VTH1YIL173W QCR6P00127 147 aa6.85□□□□□ -1.31
VTH1YIL173W NOP8Q08287 484 aaPredicted RBP6.85□□□□□ -1.31
VTH1YIL173W SEC3P33332 1336 aaKnown RBP6.84□□□□□ -1.31
VTH1YIL173W PAP2P53632 584 aaKnown RBP6.84□□□□□ -1.31
VTH1YIL173W URN1Q06525 465 aaKnown RBP6.82□□□□□ -1.32
VTH1YIL173W ESC2Q06340 456 aa6.81□□□□□ -1.32
VTH1YIL173W SKI3P17883 1432 aaKnown RBP6.81□□□□□ -1.32
VTH1YIL173W MRX12P47084 519 aa6.79□□□□□ -1.32
VTH1YIL173W FUN12P39730 1002 aaKnown RBP6.79□□□□□ -1.32
VTH1YIL173W JIP3O13555 125 aa6.76□□□□□ -1.33
VTH1YIL173W BFR2Q06631 534 aaKnown RBP6.76□□□□□ -1.33
VTH1YIL173W YRB30P53107 440 aaPredicted RBP6.75□□□□□ -1.33
VTH1YIL173W YFR016CP43597 1233 aaKnown RBP6.73□□□□□ -1.33
VTH1YIL173W RSE1Q04693 1361 aaKnown RBP6.73□□□□□ -1.33
VTH1YIL173W RAD2P07276 1031 aa6.72□□□□□ -1.33
VTH1YIL173W STH1P32597 1359 aa6.71□□□□□ -1.33
VTH1YIL173W SSN2P38931 1420 aa6.69□□□□□ -1.34
VTH1YIL173W NSR1P27476 414 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
VTH1YIL173W RTF1P53064 558 aa6.68□□□□□ -1.34
VTH1YIL173W BUD4P47136 1447 aa6.68□□□□□ -1.34
VTH1YIL173W ENP2P48234 707 aaKnown RBP6.67□□□□□ -1.34
VTH1YIL173W YTA7P40340 1379 aa6.67□□□□□ -1.34
VTH1YIL173W TPM1P17536 199 aaKnown RBP6.67□□□□□ -1.34
VTH1YIL173W SMC4Q12267 1418 aa6.66□□□□□ -1.34
VTH1YIL173W KAR2P16474 682 aaKnown RBP6.65□□□□□ -1.35
VTH1YIL173W PAN1P32521 1480 aa6.65□□□□□ -1.35
VTH1YIL173W TAF5P38129 798 aa6.64□□□□□ -1.35
VTH1YIL173W YPR148CQ06523 435 aa6.64□□□□□ -1.35
VTH1YIL173W MAK21Q12176 1025 aaKnown RBP6.64□□□□□ -1.35
VTH1YIL173W SUP35P05453 685 aaKnown RBP6.64□□□□□ -1.35
VTH1YIL173W YGL081WP53156 320 aa6.62□□□□□ -1.35
VTH1YIL173W EBP2P36049 427 aaKnown RBP6.61□□□□□ -1.35
VTH1YIL173W RPC31P17890 251 aa6.61□□□□□ -1.35
VTH1YIL173W PDS5Q04264 1277 aa6.61□□□□□ -1.35
VTH1YIL173W NMD2P38798 1089 aaKnown RBP6.6□□□□□ -1.35
VTH1YIL173W SVF1Q05515 481 aa6.59□□□□□ -1.36
VTH1YIL173W KIP3P53086 805 aaKnown RBP6.58□□□□□ -1.36
VTH1YIL173W ESL2P36168 1195 aa6.58□□□□□ -1.36
VTH1YIL173W YJL181WP46987 611 aa6.57□□□□□ -1.36
VTH1YIL173W NCB2Q92317 146 aa6.57□□□□□ -1.36
VTH1YIL173W ECM16Q04217 1267 aaKnown RBP6.56□□□□□ -1.36
VTH1YIL173W BDP1P46678 594 aa6.56□□□□□ -1.36
VTH1YIL173W ARP5P53946 755 aa6.56□□□□□ -1.36
VTH1YIL173W RTR1P40084 226 aaPredicted RBP6.55□□□□□ -1.36
VTH1YIL173W TCB3Q03640 1545 aaKnown RBP6.54□□□□□ -1.36
VTH1YIL173W PKH1Q03407 766 aa6.54□□□□□ -1.36
VTH1YIL173W PEX14P53112 341 aa6.54□□□□□ -1.36
VTH1YIL173W SPT7P35177 1332 aa6.53□□□□□ -1.36
VTH1YIL173W CBF5P33322 483 aaKnown RBP RIP-Chip data6.53□□□□□ -1.36not detected
VTH1YIL173W CDC45Q08032 650 aa6.53□□□□□ -1.36
VTH1YIL173W BTN2P53286 410 aa6.52□□□□□ -1.37
VTH1YIL173W RRP8P38961 392 aaKnown RBP6.52□□□□□ -1.37
VTH1YIL173W BUD27P43573 796 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
VTH1YIL173W MIC60P36112 540 aa6.51□□□□□ -1.37
VTH1YIL173W MFT1P33441 392 aaKnown RBP6.51□□□□□ -1.37
VTH1YIL173W ETT1Q08421 412 aaKnown RBP6.5□□□□□ -1.37
VTH1YIL173W MET10P39692 1035 aa6.5□□□□□ -1.37
VTH1YIL173W ESF1Q06344 628 aaKnown RBP6.5□□□□□ -1.37
VTH1YIL173W CHZ1P40019 153 aaPredicted RBP6.49□□□□□ -1.37
VTH1YIL173W CLC1P17891 233 aa6.49□□□□□ -1.37
VTH1YIL173W ABP1P15891 592 aaKnown RBP6.49□□□□□ -1.37
VTH1YIL173W SEN54Q02825 467 aaPredicted RBP6.49□□□□□ -1.37
VTH1YIL173W SSA2P10592 639 aaKnown RBP6.49□□□□□ -1.37
VTH1YIL173W YDL144CQ07589 356 aa6.48□□□□□ -1.37
VTH1YIL173W VPS24P36095 224 aaKnown RBP6.48□□□□□ -1.37
VTH1YIL173W RIX1P38883 763 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms