Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB1AP62820 ABHD17AP5-201ENST00000580133 923 ntBASIC21.2■□□□□ 0.98
RAB1AP62820 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB1AP62820 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB1AP62820 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAB1AP62820 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAB1AP62820 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RAB1AP62820 AC026202.3-201ENST00000600805 1127 ntBASIC21.19■□□□□ 0.98
RAB1AP62820 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.19■□□□□ 0.98
RAB1AP62820 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAB1AP62820 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.18■□□□□ 0.98
RAB1AP62820 AC133552.2-201ENST00000619106 1032 ntBASIC21.18■□□□□ 0.98
RAB1AP62820 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAB1AP62820 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAB1AP62820 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.18■□□□□ 0.98
RAB1AP62820 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.18■□□□□ 0.98
RAB1AP62820 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB1AP62820 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RAB1AP62820 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB1AP62820 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
RAB1AP62820 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB1AP62820 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB1AP62820 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB1AP62820 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.16■□□□□ 0.98
RAB1AP62820 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB1AP62820 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB1AP62820 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.16■□□□□ 0.98
RAB1AP62820 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.16■□□□□ 0.98
RAB1AP62820 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.16■□□□□ 0.98
RAB1AP62820 AC009831.1-201ENST00000580420 1582 ntBASIC21.15■□□□□ 0.98
RAB1AP62820 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAB1AP62820 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAB1AP62820 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RAB1AP62820 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.15■□□□□ 0.98
RAB1AP62820 RAP2CP1-202ENST00000605179 643 ntBASIC21.15■□□□□ 0.98
RAB1AP62820 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RAB1AP62820 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RAB1AP62820 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB1AP62820 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB1AP62820 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
RAB1AP62820 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB1AP62820 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB1AP62820 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB1AP62820 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.14■□□□□ 0.98
RAB1AP62820 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.14■□□□□ 0.97
RAB1AP62820 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB1AP62820 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAB1AP62820 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAB1AP62820 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RAB1AP62820 U85056.1-201ENST00000616429 682 ntBASIC21.13■□□□□ 0.97
RAB1AP62820 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB1AP62820 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB1AP62820 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.13■□□□□ 0.97
RAB1AP62820 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB1AP62820 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RAB1AP62820 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB1AP62820 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAB1AP62820 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAB1AP62820 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB1AP62820 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RAB1AP62820 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.11■□□□□ 0.97
RAB1AP62820 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.11■□□□□ 0.97
RAB1AP62820 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAB1AP62820 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RAB1AP62820 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB1AP62820 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB1AP62820 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.11■□□□□ 0.97
RAB1AP62820 AC092803.2-201ENST00000564287 1899 ntBASIC21.11■□□□□ 0.97
RAB1AP62820 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB1AP62820 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.1■□□□□ 0.97
RAB1AP62820 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAB1AP62820 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAB1AP62820 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAB1AP62820 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB1AP62820 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAB1AP62820 NTF6A-201ENST00000591175 560 ntBASIC21.1■□□□□ 0.97
RAB1AP62820 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAB1AP62820 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAB1AP62820 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB1AP62820 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RAB1AP62820 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAB1AP62820 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB1AP62820 AL592293.1-201ENST00000502889 1188 ntBASIC21.09■□□□□ 0.97
RAB1AP62820 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.09■□□□□ 0.97
RAB1AP62820 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB1AP62820 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB1AP62820 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.08■□□□□ 0.97
RAB1AP62820 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAB1AP62820 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAB1AP62820 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.08■□□□□ 0.97
RAB1AP62820 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RAB1AP62820 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.08■□□□□ 0.97
RAB1AP62820 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
RAB1AP62820 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RAB1AP62820 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAB1AP62820 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RAB1AP62820 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.07■□□□□ 0.96
RAB1AP62820 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.07■□□□□ 0.96
RAB1AP62820 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RAB1AP62820 AC091060.1-201ENST00000623524 1766 ntBASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms