Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CKS1BP61024 AC108673.1-201ENST00000510422 1159 ntBASIC16.68■□□□□ 0.26
CKS1BP61024 AC005559.1-201ENST00000589661 871 ntBASIC16.68■□□□□ 0.26
CKS1BP61024 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CKS1BP61024 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC16.68■□□□□ 0.26
CKS1BP61024 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC16.68■□□□□ 0.26
CKS1BP61024 EI24-212ENST00000615917 1407 ntTSL 2 BASIC16.68■□□□□ 0.26
CKS1BP61024 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CKS1BP61024 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CKS1BP61024 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CKS1BP61024 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CKS1BP61024 AC135983.2-203ENST00000454486 1613 ntBASIC16.67■□□□□ 0.26
CKS1BP61024 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CKS1BP61024 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CKS1BP61024 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CKS1BP61024 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC16.67■□□□□ 0.26
CKS1BP61024 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CKS1BP61024 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC16.67■□□□□ 0.26
CKS1BP61024 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CKS1BP61024 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CKS1BP61024 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CKS1BP61024 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CKS1BP61024 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC16.66■□□□□ 0.26
CKS1BP61024 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC16.66■□□□□ 0.26
CKS1BP61024 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CKS1BP61024 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CKS1BP61024 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CKS1BP61024 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CKS1BP61024 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKS1BP61024 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKS1BP61024 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKS1BP61024 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC16.65■□□□□ 0.26
CKS1BP61024 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CKS1BP61024 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKS1BP61024 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC16.65■□□□□ 0.26
CKS1BP61024 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.64■□□□□ 0.26
CKS1BP61024 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC16.64■□□□□ 0.25
CKS1BP61024 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CKS1BP61024 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CKS1BP61024 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CKS1BP61024 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.64■□□□□ 0.25
CKS1BP61024 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CKS1BP61024 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
CKS1BP61024 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CKS1BP61024 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CKS1BP61024 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CKS1BP61024 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CKS1BP61024 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CKS1BP61024 AC091060.1-201ENST00000623524 1766 ntBASIC16.64■□□□□ 0.25
CKS1BP61024 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CKS1BP61024 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKS1BP61024 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CKS1BP61024 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKS1BP61024 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKS1BP61024 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CKS1BP61024 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKS1BP61024 SLC25A24-204ENST00000569674 2357 ntBASIC16.62■□□□□ 0.25
CKS1BP61024 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CKS1BP61024 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKS1BP61024 WHAMMP2-203ENST00000563942 1603 ntBASIC16.62■□□□□ 0.25
CKS1BP61024 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC16.62■□□□□ 0.25
CKS1BP61024 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CKS1BP61024 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CKS1BP61024 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CKS1BP61024 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CKS1BP61024 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC16.61■□□□□ 0.25
CKS1BP61024 AC145676.1-201ENST00000514988 2004 ntBASIC16.61■□□□□ 0.25
CKS1BP61024 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC16.61■□□□□ 0.25
CKS1BP61024 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CKS1BP61024 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.61■□□□□ 0.25
CKS1BP61024 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CKS1BP61024 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CKS1BP61024 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKS1BP61024 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CKS1BP61024 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKS1BP61024 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKS1BP61024 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC16.6■□□□□ 0.25
CKS1BP61024 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKS1BP61024 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKS1BP61024 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKS1BP61024 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKS1BP61024 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CKS1BP61024 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CKS1BP61024 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CKS1BP61024 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CKS1BP61024 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CKS1BP61024 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CKS1BP61024 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.59■□□□□ 0.25
CKS1BP61024 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CKS1BP61024 HNRNPLP2-201ENST00000568980 1570 ntBASIC16.59■□□□□ 0.25
CKS1BP61024 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CKS1BP61024 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CKS1BP61024 AC020928.2-201ENST00000588717 2197 ntBASIC16.58■□□□□ 0.25
CKS1BP61024 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CKS1BP61024 LINC00273-201ENST00000539813 1452 ntBASIC16.58■□□□□ 0.24
CKS1BP61024 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.58■□□□□ 0.24
CKS1BP61024 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CKS1BP61024 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CKS1BP61024 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.57■□□□□ 0.24
CKS1BP61024 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms