Protein–RNA interactions for Protein: P60059

SEC61G, Protein transport protein Sec61 subunit gamma, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61GP60059 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61GP60059 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61GP60059 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC13.63□□□□□ -0.23
SEC61GP60059 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC61GP60059 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC61GP60059 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC61GP60059 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SEC61GP60059 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SEC61GP60059 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SEC61GP60059 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC61GP60059 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC61GP60059 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC61GP60059 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC13.62□□□□□ -0.23
SEC61GP60059 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC13.61□□□□□ -0.23
SEC61GP60059 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC13.61□□□□□ -0.23
SEC61GP60059 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
SEC61GP60059 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61GP60059 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.61□□□□□ -0.23
SEC61GP60059 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61GP60059 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61GP60059 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SEC61GP60059 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61GP60059 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61GP60059 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SEC61GP60059 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61GP60059 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61GP60059 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
SEC61GP60059 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61GP60059 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61GP60059 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61GP60059 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61GP60059 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61GP60059 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.59□□□□□ -0.23
SEC61GP60059 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61GP60059 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61GP60059 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61GP60059 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61GP60059 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61GP60059 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61GP60059 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SEC61GP60059 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61GP60059 NFIC-211ENST00000641145 8399 ntBASIC13.58□□□□□ -0.24
SEC61GP60059 AC093323.1-202ENST00000635031 2045 ntBASIC13.58□□□□□ -0.24
SEC61GP60059 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61GP60059 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61GP60059 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC13.58□□□□□ -0.24
SEC61GP60059 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61GP60059 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC13.58□□□□□ -0.24
SEC61GP60059 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61GP60059 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61GP60059 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SEC61GP60059 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61GP60059 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61GP60059 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61GP60059 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61GP60059 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC13.57□□□□□ -0.24
SEC61GP60059 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61GP60059 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC13.56□□□□□ -0.24
SEC61GP60059 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61GP60059 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SEC61GP60059 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61GP60059 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61GP60059 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
SEC61GP60059 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61GP60059 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61GP60059 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61GP60059 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61GP60059 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61GP60059 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61GP60059 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
SEC61GP60059 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61GP60059 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC13.55□□□□□ -0.24
SEC61GP60059 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61GP60059 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61GP60059 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61GP60059 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61GP60059 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61GP60059 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SEC61GP60059 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61GP60059 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61GP60059 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC13.55□□□□□ -0.24
SEC61GP60059 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC13.55□□□□□ -0.24
SEC61GP60059 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61GP60059 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SEC61GP60059 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61GP60059 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61GP60059 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61GP60059 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SEC61GP60059 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61GP60059 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61GP60059 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61GP60059 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61GP60059 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61GP60059 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61GP60059 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC13.54□□□□□ -0.24
SEC61GP60059 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.53□□□□□ -0.24
SEC61GP60059 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61GP60059 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61GP60059 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61GP60059 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms