Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.5■■■□□ 2.63
KCNQ4P56696 TRIR-202ENST00000588213 841 ntTSL 3 BASIC31.48■■■□□ 2.63
KCNQ4P56696 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
KCNQ4P56696 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
KCNQ4P56696 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
KCNQ4P56696 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.48■■■□□ 2.63
KCNQ4P56696 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
KCNQ4P56696 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
KCNQ4P56696 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
KCNQ4P56696 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
KCNQ4P56696 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
KCNQ4P56696 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
KCNQ4P56696 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
KCNQ4P56696 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
KCNQ4P56696 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.46■■■□□ 2.63
KCNQ4P56696 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
KCNQ4P56696 NALT1-201ENST00000429224 738 ntTSL 5 BASIC31.46■■■□□ 2.63
KCNQ4P56696 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC31.46■■■□□ 2.63
KCNQ4P56696 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC31.46■■■□□ 2.63
KCNQ4P56696 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
KCNQ4P56696 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.63
KCNQ4P56696 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC31.45■■■□□ 2.63
KCNQ4P56696 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC31.45■■■□□ 2.63
KCNQ4P56696 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC31.45■■■□□ 2.63
KCNQ4P56696 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
KCNQ4P56696 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
KCNQ4P56696 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
KCNQ4P56696 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
KCNQ4P56696 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
KCNQ4P56696 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
KCNQ4P56696 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC31.44■■■□□ 2.62
KCNQ4P56696 AL139246.5-201ENST00000606645 996 ntBASIC31.44■■■□□ 2.62
KCNQ4P56696 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
KCNQ4P56696 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC31.43■■■□□ 2.62
KCNQ4P56696 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC31.43■■■□□ 2.62
KCNQ4P56696 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC31.43■■■□□ 2.62
KCNQ4P56696 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
KCNQ4P56696 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
KCNQ4P56696 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC31.42■■■□□ 2.62
KCNQ4P56696 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC31.42■■■□□ 2.62
KCNQ4P56696 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
KCNQ4P56696 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
KCNQ4P56696 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
KCNQ4P56696 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC31.41■■■□□ 2.62
KCNQ4P56696 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
KCNQ4P56696 AC131281.2-201ENST00000520478 145 ntBASIC31.41■■■□□ 2.62
KCNQ4P56696 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.41■■■□□ 2.62
KCNQ4P56696 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
KCNQ4P56696 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
KCNQ4P56696 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC31.4■■■□□ 2.62
KCNQ4P56696 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
KCNQ4P56696 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
KCNQ4P56696 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
KCNQ4P56696 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.4■■■□□ 2.62
KCNQ4P56696 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
KCNQ4P56696 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC31.4■■■□□ 2.62
KCNQ4P56696 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
KCNQ4P56696 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
KCNQ4P56696 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.39■■■□□ 2.62
KCNQ4P56696 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
KCNQ4P56696 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
KCNQ4P56696 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
KCNQ4P56696 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.37■■■□□ 2.61
KCNQ4P56696 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC31.36■■■□□ 2.61
KCNQ4P56696 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
KCNQ4P56696 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
KCNQ4P56696 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
KCNQ4P56696 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC31.34■■■□□ 2.61
KCNQ4P56696 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC31.34■■■□□ 2.61
KCNQ4P56696 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC31.34■■■□□ 2.61
KCNQ4P56696 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
KCNQ4P56696 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
KCNQ4P56696 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
KCNQ4P56696 KRT18P24-201ENST00000344739 1156 ntBASIC31.32■■■□□ 2.6
KCNQ4P56696 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC31.32■■■□□ 2.6
KCNQ4P56696 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC31.32■■■□□ 2.6
KCNQ4P56696 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
KCNQ4P56696 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC31.31■■■□□ 2.6
KCNQ4P56696 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC31.31■■■□□ 2.6
KCNQ4P56696 SRR-208ENST00000576848 588 ntTSL 4 BASIC31.31■■■□□ 2.6
KCNQ4P56696 AC137630.3-201ENST00000607245 391 ntBASIC31.31■■■□□ 2.6
KCNQ4P56696 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.31■■■□□ 2.6
KCNQ4P56696 AC021242.3-201ENST00000607598 1377 ntBASIC31.3■■■□□ 2.6
KCNQ4P56696 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
KCNQ4P56696 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
KCNQ4P56696 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC31.3■■■□□ 2.6
KCNQ4P56696 AC110285.6-201ENST00000617652 491 ntBASIC31.3■■■□□ 2.6
KCNQ4P56696 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC31.3■■■□□ 2.6
KCNQ4P56696 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
KCNQ4P56696 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
KCNQ4P56696 AL136116.3-201ENST00000402907 1138 ntBASIC31.29■■■□□ 2.6
KCNQ4P56696 RPP21-222ENST00000433076 577 ntTSL 2 BASIC31.29■■■□□ 2.6
KCNQ4P56696 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC31.28■■■□□ 2.6
KCNQ4P56696 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
KCNQ4P56696 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.27■■■□□ 2.6
KCNQ4P56696 AC120024.1-201ENST00000562672 995 ntBASIC31.27■■■□□ 2.6
KCNQ4P56696 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC31.27■■■□□ 2.6
KCNQ4P56696 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
KCNQ4P56696 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC31.26■■■□□ 2.6
KCNQ4P56696 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms