Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.27■■□□□ 1
SRP9P49458 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
SRP9P49458 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SRP9P49458 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SRP9P49458 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.27■■□□□ 1
SRP9P49458 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.27■■□□□ 1
SRP9P49458 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.27■■□□□ 1
SRP9P49458 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.27■■□□□ 1
SRP9P49458 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.27■■□□□ 1
SRP9P49458 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.27■■□□□ 1
SRP9P49458 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.27■■□□□ 1
SRP9P49458 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SRP9P49458 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SRP9P49458 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SRP9P49458 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SRP9P49458 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SRP9P49458 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SRP9P49458 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
SRP9P49458 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SRP9P49458 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SRP9P49458 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRP9P49458 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRP9P49458 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRP9P49458 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRP9P49458 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRP9P49458 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.25■□□□□ 0.99
SRP9P49458 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.25■□□□□ 0.99
SRP9P49458 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRP9P49458 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SRP9P49458 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
SRP9P49458 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SRP9P49458 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SRP9P49458 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SRP9P49458 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SRP9P49458 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.24■□□□□ 0.99
SRP9P49458 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.24■□□□□ 0.99
SRP9P49458 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SRP9P49458 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.23■□□□□ 0.99
SRP9P49458 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.23■□□□□ 0.99
SRP9P49458 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SRP9P49458 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRP9P49458 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SRP9P49458 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRP9P49458 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRP9P49458 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRP9P49458 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRP9P49458 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRP9P49458 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRP9P49458 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SRP9P49458 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
SRP9P49458 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRP9P49458 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SRP9P49458 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SRP9P49458 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SRP9P49458 AP004609.3-201ENST00000610705 1884 ntBASIC21.21■□□□□ 0.99
SRP9P49458 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SRP9P49458 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SRP9P49458 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
SRP9P49458 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRP9P49458 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.2■□□□□ 0.98
SRP9P49458 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SRP9P49458 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRP9P49458 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRP9P49458 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRP9P49458 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRP9P49458 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SRP9P49458 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.19■□□□□ 0.98
SRP9P49458 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRP9P49458 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SRP9P49458 AC126177.7-201ENST00000547904 679 ntBASIC21.19■□□□□ 0.98
SRP9P49458 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SRP9P49458 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SRP9P49458 AC133561.1-201ENST00000568600 2415 ntBASIC21.19■□□□□ 0.98
SRP9P49458 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRP9P49458 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRP9P49458 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRP9P49458 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SRP9P49458 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.18■□□□□ 0.98
SRP9P49458 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.18■□□□□ 0.98
SRP9P49458 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SRP9P49458 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRP9P49458 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SRP9P49458 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SRP9P49458 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.17■□□□□ 0.98
SRP9P49458 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.17■□□□□ 0.98
SRP9P49458 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SRP9P49458 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.17■□□□□ 0.98
SRP9P49458 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRP9P49458 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRP9P49458 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SRP9P49458 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
SRP9P49458 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SRP9P49458 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SRP9P49458 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SRP9P49458 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.16■□□□□ 0.98
SRP9P49458 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SRP9P49458 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.16■□□□□ 0.98
SRP9P49458 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.16■□□□□ 0.98
SRP9P49458 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
SRP9P49458 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms