Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBX5P45973 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBX5P45973 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.59■□□□□ 0.89
CBX5P45973 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX5P45973 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX5P45973 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX5P45973 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX5P45973 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.59■□□□□ 0.89
CBX5P45973 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.59■□□□□ 0.89
CBX5P45973 DUX4L28-201ENST00000623687 678 ntBASIC20.59■□□□□ 0.89
CBX5P45973 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX5P45973 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
CBX5P45973 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX5P45973 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CBX5P45973 MIR3665-201ENST00000578708 105 ntBASIC20.58■□□□□ 0.89
CBX5P45973 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CBX5P45973 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
CBX5P45973 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CBX5P45973 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CBX5P45973 CLDN5-201ENST00000403084 2357 ntBASIC20.57■□□□□ 0.88
CBX5P45973 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX5P45973 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX5P45973 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CBX5P45973 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.56■□□□□ 0.88
CBX5P45973 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.56■□□□□ 0.88
CBX5P45973 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CBX5P45973 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CBX5P45973 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX5P45973 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CBX5P45973 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX5P45973 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX5P45973 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX5P45973 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CBX5P45973 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.54■□□□□ 0.88
CBX5P45973 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CBX5P45973 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.54■□□□□ 0.88
CBX5P45973 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX5P45973 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX5P45973 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.54■□□□□ 0.88
CBX5P45973 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX5P45973 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.53■□□□□ 0.88
CBX5P45973 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.53■□□□□ 0.88
CBX5P45973 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CBX5P45973 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CBX5P45973 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CBX5P45973 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CBX5P45973 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CBX5P45973 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.53■□□□□ 0.88
CBX5P45973 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CBX5P45973 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CBX5P45973 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CBX5P45973 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
CBX5P45973 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.52■□□□□ 0.88
CBX5P45973 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CBX5P45973 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CBX5P45973 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.51■□□□□ 0.87
CBX5P45973 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CBX5P45973 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CBX5P45973 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.51■□□□□ 0.87
CBX5P45973 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CBX5P45973 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CBX5P45973 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CBX5P45973 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CBX5P45973 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CBX5P45973 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CBX5P45973 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CBX5P45973 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CBX5P45973 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CBX5P45973 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CBX5P45973 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CBX5P45973 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
CBX5P45973 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CBX5P45973 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CBX5P45973 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.5■□□□□ 0.87
CBX5P45973 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CBX5P45973 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CBX5P45973 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CBX5P45973 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.49■□□□□ 0.87
CBX5P45973 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CBX5P45973 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.49■□□□□ 0.87
CBX5P45973 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.49■□□□□ 0.87
CBX5P45973 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CBX5P45973 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
CBX5P45973 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.48■□□□□ 0.87
CBX5P45973 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.48■□□□□ 0.87
CBX5P45973 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.48■□□□□ 0.87
CBX5P45973 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.48■□□□□ 0.87
CBX5P45973 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CBX5P45973 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CBX5P45973 AC022211.4-201ENST00000625094 2161 ntBASIC20.48■□□□□ 0.87
CBX5P45973 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.47■□□□□ 0.87
CBX5P45973 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CBX5P45973 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CBX5P45973 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.47■□□□□ 0.87
CBX5P45973 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.47■□□□□ 0.87
CBX5P45973 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CBX5P45973 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.47■□□□□ 0.87
CBX5P45973 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CBX5P45973 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CBX5P45973 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms