Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC27.86■■■□□ 2.05
HTTP42858 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC27.86■■■□□ 2.05
HTTP42858 AP004833.2-201ENST00000532228 1454 ntBASIC27.86■■■□□ 2.05
HTTP42858 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
HTTP42858 AC021242.3-201ENST00000607598 1377 ntBASIC27.86■■■□□ 2.05
HTTP42858 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
HTTP42858 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC27.85■■■□□ 2.05
HTTP42858 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.85■■■□□ 2.05
HTTP42858 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
HTTP42858 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
HTTP42858 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC27.85■■■□□ 2.05
HTTP42858 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
HTTP42858 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
HTTP42858 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC27.85■■■□□ 2.05
HTTP42858 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC27.85■■■□□ 2.05
HTTP42858 AL117332.1-201ENST00000622628 974 ntBASIC27.85■■■□□ 2.05
HTTP42858 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
HTTP42858 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
HTTP42858 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.84■■■□□ 2.05
HTTP42858 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
HTTP42858 AC096631.2-201ENST00000436136 790 ntBASIC27.83■■■□□ 2.05
HTTP42858 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
HTTP42858 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC27.83■■■□□ 2.04
HTTP42858 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.83■■■□□ 2.04
HTTP42858 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC27.83■■■□□ 2.04
HTTP42858 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
HTTP42858 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.82■■■□□ 2.04
HTTP42858 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
HTTP42858 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
HTTP42858 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
HTTP42858 TSPY9P-201ENST00000440215 945 ntBASIC27.82■■■□□ 2.04
HTTP42858 TSPY11P-201ENST00000442607 1045 ntBASIC27.82■■■□□ 2.04
HTTP42858 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
HTTP42858 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC27.82■■■□□ 2.04
HTTP42858 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
HTTP42858 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.81■■■□□ 2.04
HTTP42858 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC27.81■■■□□ 2.04
HTTP42858 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.81■■■□□ 2.04
HTTP42858 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
HTTP42858 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
HTTP42858 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
HTTP42858 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC27.8■■■□□ 2.04
HTTP42858 AL512631.2-201ENST00000604634 923 ntBASIC27.79■■■□□ 2.04
HTTP42858 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC27.78■■■□□ 2.04
HTTP42858 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
HTTP42858 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC27.78■■■□□ 2.04
HTTP42858 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
HTTP42858 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
HTTP42858 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC27.78■■■□□ 2.04
HTTP42858 AC104564.3-201ENST00000582367 638 ntBASIC27.78■■■□□ 2.04
HTTP42858 AC137630.3-201ENST00000607245 391 ntBASIC27.78■■■□□ 2.04
HTTP42858 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
HTTP42858 EBPL-204ENST00000378272 766 ntTSL 3 BASIC27.77■■■□□ 2.04
HTTP42858 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC27.77■■■□□ 2.04
HTTP42858 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
HTTP42858 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC27.76■■■□□ 2.03
HTTP42858 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
HTTP42858 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
HTTP42858 AC135279.3-201ENST00000610945 1311 ntBASIC27.75■■■□□ 2.03
HTTP42858 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC27.75■■■□□ 2.03
HTTP42858 QDPR-206ENST00000508623 601 ntTSL 3 BASIC27.75■■■□□ 2.03
HTTP42858 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC27.75■■■□□ 2.03
HTTP42858 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC27.75■■■□□ 2.03
HTTP42858 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC27.75■■■□□ 2.03
HTTP42858 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
HTTP42858 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
HTTP42858 MIR3621-201ENST00000580529 85 ntBASIC27.75■■■□□ 2.03
HTTP42858 AC092028.1-203ENST00000608262 953 ntBASIC27.75■■■□□ 2.03
HTTP42858 AL139393.2-201ENST00000608721 2025 ntBASIC27.75■■■□□ 2.03
HTTP42858 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC27.75■■■□□ 2.03
HTTP42858 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
HTTP42858 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC27.74■■■□□ 2.03
HTTP42858 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC27.74■■■□□ 2.03
HTTP42858 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
HTTP42858 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC27.74■■■□□ 2.03
HTTP42858 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.74■■■□□ 2.03
HTTP42858 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
HTTP42858 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
HTTP42858 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC27.73■■■□□ 2.03
HTTP42858 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC27.73■■■□□ 2.03
HTTP42858 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
HTTP42858 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
HTTP42858 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
HTTP42858 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
HTTP42858 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
HTTP42858 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
HTTP42858 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.72■■■□□ 2.03
HTTP42858 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC27.72■■■□□ 2.03
HTTP42858 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.71■■■□□ 2.03
HTTP42858 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC27.71■■■□□ 2.03
HTTP42858 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.71■■■□□ 2.03
HTTP42858 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC27.7■■■□□ 2.02
HTTP42858 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
HTTP42858 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
HTTP42858 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
HTTP42858 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
HTTP42858 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
HTTP42858 KRT18P24-201ENST00000344739 1156 ntBASIC27.68■■■□□ 2.02
HTTP42858 MIR5787-201ENST00000611784 55 ntBASIC27.67■■■□□ 2.02
HTTP42858 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC27.67■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms