Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 UNC93B8-201ENST00000511903 705 ntBASIC30.39■■■□□ 2.46
PDE6BP35913 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
PDE6BP35913 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
PDE6BP35913 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
PDE6BP35913 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC30.38■■■□□ 2.45
PDE6BP35913 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
PDE6BP35913 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.38■■■□□ 2.45
PDE6BP35913 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC30.37■■■□□ 2.45
PDE6BP35913 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.37■■■□□ 2.45
PDE6BP35913 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PDE6BP35913 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
PDE6BP35913 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PDE6BP35913 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC30.36■■■□□ 2.45
PDE6BP35913 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC30.36■■■□□ 2.45
PDE6BP35913 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC30.36■■■□□ 2.45
PDE6BP35913 KRT16P3-201ENST00000439127 1283 ntBASIC30.35■■■□□ 2.45
PDE6BP35913 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC30.35■■■□□ 2.45
PDE6BP35913 KRT18P24-201ENST00000344739 1156 ntBASIC30.34■■■□□ 2.45
PDE6BP35913 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
PDE6BP35913 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
PDE6BP35913 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC30.33■■■□□ 2.45
PDE6BP35913 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC30.33■■■□□ 2.45
PDE6BP35913 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC30.32■■■□□ 2.44
PDE6BP35913 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
PDE6BP35913 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PDE6BP35913 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PDE6BP35913 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC30.32■■■□□ 2.44
PDE6BP35913 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
PDE6BP35913 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PDE6BP35913 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PDE6BP35913 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PDE6BP35913 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
PDE6BP35913 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
PDE6BP35913 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC30.3■■■□□ 2.44
PDE6BP35913 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PDE6BP35913 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.3■■■□□ 2.44
PDE6BP35913 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.3■■■□□ 2.44
PDE6BP35913 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30.3■■■□□ 2.44
PDE6BP35913 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
PDE6BP35913 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
PDE6BP35913 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PDE6BP35913 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PDE6BP35913 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
PDE6BP35913 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
PDE6BP35913 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC30.28■■■□□ 2.44
PDE6BP35913 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC30.28■■■□□ 2.44
PDE6BP35913 AC137630.3-201ENST00000607245 391 ntBASIC30.28■■■□□ 2.44
PDE6BP35913 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC30.28■■■□□ 2.44
PDE6BP35913 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PDE6BP35913 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
PDE6BP35913 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
PDE6BP35913 MIR638-201ENST00000385237 100 ntBASIC30.26■■■□□ 2.43
PDE6BP35913 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC30.26■■■□□ 2.43
PDE6BP35913 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PDE6BP35913 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
PDE6BP35913 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PDE6BP35913 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC30.25■■■□□ 2.43
PDE6BP35913 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC30.25■■■□□ 2.43
PDE6BP35913 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.24■■■□□ 2.43
PDE6BP35913 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
PDE6BP35913 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PDE6BP35913 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
PDE6BP35913 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC30.23■■■□□ 2.43
PDE6BP35913 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
PDE6BP35913 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC30.23■■■□□ 2.43
PDE6BP35913 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PDE6BP35913 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
PDE6BP35913 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC30.22■■■□□ 2.43
PDE6BP35913 AC021242.3-201ENST00000607598 1377 ntBASIC30.22■■■□□ 2.43
PDE6BP35913 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.21■■■□□ 2.43
PDE6BP35913 TSPY9P-201ENST00000440215 945 ntBASIC30.21■■■□□ 2.43
PDE6BP35913 TSPY11P-201ENST00000442607 1045 ntBASIC30.21■■■□□ 2.43
PDE6BP35913 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
PDE6BP35913 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
PDE6BP35913 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
PDE6BP35913 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.2■■■□□ 2.43
PDE6BP35913 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.43
PDE6BP35913 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC30.2■■■□□ 2.43
PDE6BP35913 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC30.19■■■□□ 2.42
PDE6BP35913 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC30.18■■■□□ 2.42
PDE6BP35913 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
PDE6BP35913 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.18■■■□□ 2.42
PDE6BP35913 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.18■■■□□ 2.42
PDE6BP35913 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC30.18■■■□□ 2.42
PDE6BP35913 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
PDE6BP35913 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
PDE6BP35913 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC30.17■■■□□ 2.42
PDE6BP35913 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
PDE6BP35913 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
PDE6BP35913 AC120024.1-201ENST00000562672 995 ntBASIC30.17■■■□□ 2.42
PDE6BP35913 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC30.17■■■□□ 2.42
PDE6BP35913 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC30.17■■■□□ 2.42
PDE6BP35913 AL139246.5-201ENST00000606645 996 ntBASIC30.17■■■□□ 2.42
PDE6BP35913 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PDE6BP35913 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC30.16■■■□□ 2.42
PDE6BP35913 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC30.16■■■□□ 2.42
PDE6BP35913 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC30.16■■■□□ 2.42
PDE6BP35913 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC30.16■■■□□ 2.42
PDE6BP35913 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
PDE6BP35913 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms