Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ACKR3P25106 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
ACKR3P25106 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ACKR3P25106 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ACKR3P25106 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ACKR3P25106 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ACKR3P25106 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ACKR3P25106 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ACKR3P25106 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ACKR3P25106 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ACKR3P25106 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ACKR3P25106 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ACKR3P25106 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ACKR3P25106 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ACKR3P25106 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ACKR3P25106 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ACKR3P25106 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.93■□□□□ 0.94
ACKR3P25106 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ACKR3P25106 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.92■□□□□ 0.94
ACKR3P25106 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ACKR3P25106 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ACKR3P25106 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ACKR3P25106 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ACKR3P25106 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ACKR3P25106 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ACKR3P25106 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.91■□□□□ 0.94
ACKR3P25106 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ACKR3P25106 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ACKR3P25106 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.91■□□□□ 0.94
ACKR3P25106 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ACKR3P25106 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.91■□□□□ 0.94
ACKR3P25106 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ACKR3P25106 AL157400.5-201ENST00000507624 621 ntBASIC20.9■□□□□ 0.94
ACKR3P25106 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ACKR3P25106 AC060814.1-201ENST00000554326 538 ntBASIC20.9■□□□□ 0.94
ACKR3P25106 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ACKR3P25106 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ACKR3P25106 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ACKR3P25106 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ACKR3P25106 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ACKR3P25106 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.89■□□□□ 0.93
ACKR3P25106 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.88■□□□□ 0.93
ACKR3P25106 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.88■□□□□ 0.93
ACKR3P25106 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACKR3P25106 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACKR3P25106 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.88■□□□□ 0.93
ACKR3P25106 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.88■□□□□ 0.93
ACKR3P25106 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ACKR3P25106 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACKR3P25106 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACKR3P25106 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ACKR3P25106 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACKR3P25106 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.88■□□□□ 0.93
ACKR3P25106 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACKR3P25106 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ACKR3P25106 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ACKR3P25106 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.87■□□□□ 0.93
ACKR3P25106 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ACKR3P25106 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ACKR3P25106 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.86■□□□□ 0.93
ACKR3P25106 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACKR3P25106 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACKR3P25106 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.86■□□□□ 0.93
ACKR3P25106 AC096887.2-201ENST00000623443 1957 ntBASIC20.86■□□□□ 0.93
ACKR3P25106 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACKR3P25106 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACKR3P25106 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACKR3P25106 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ACKR3P25106 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.85■□□□□ 0.93
ACKR3P25106 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACKR3P25106 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACKR3P25106 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
ACKR3P25106 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ACKR3P25106 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACKR3P25106 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.85■□□□□ 0.93
ACKR3P25106 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACKR3P25106 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.85■□□□□ 0.93
ACKR3P25106 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACKR3P25106 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ACKR3P25106 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ACKR3P25106 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACKR3P25106 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACKR3P25106 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACKR3P25106 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ACKR3P25106 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACKR3P25106 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ACKR3P25106 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.84■□□□□ 0.93
ACKR3P25106 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACKR3P25106 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
ACKR3P25106 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ACKR3P25106 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ACKR3P25106 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ACKR3P25106 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.82■□□□□ 0.92
ACKR3P25106 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.82■□□□□ 0.92
ACKR3P25106 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACKR3P25106 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACKR3P25106 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.82■□□□□ 0.92
ACKR3P25106 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
ACKR3P25106 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ACKR3P25106 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms