Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.27■■■□□ 2.6
SNRPA1P09661 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC31.26■■■□□ 2.59
SNRPA1P09661 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
SNRPA1P09661 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
SNRPA1P09661 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC31.26■■■□□ 2.59
SNRPA1P09661 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SNRPA1P09661 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
SNRPA1P09661 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SNRPA1P09661 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SNRPA1P09661 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SNRPA1P09661 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC31.25■■■□□ 2.59
SNRPA1P09661 AC142472.1-201ENST00000612013 1741 ntBASIC31.25■■■□□ 2.59
SNRPA1P09661 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SNRPA1P09661 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC31.25■■■□□ 2.59
SNRPA1P09661 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SNRPA1P09661 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SNRPA1P09661 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SNRPA1P09661 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SNRPA1P09661 AC103724.3-201ENST00000564481 992 ntBASIC31.23■■■□□ 2.59
SNRPA1P09661 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC31.23■■■□□ 2.59
SNRPA1P09661 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SNRPA1P09661 LONRF2P2-201ENST00000439212 571 ntBASIC31.22■■■□□ 2.59
SNRPA1P09661 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SNRPA1P09661 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC31.22■■■□□ 2.59
SNRPA1P09661 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SNRPA1P09661 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC31.21■■■□□ 2.59
SNRPA1P09661 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SNRPA1P09661 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
SNRPA1P09661 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SNRPA1P09661 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
SNRPA1P09661 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
SNRPA1P09661 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
SNRPA1P09661 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SNRPA1P09661 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC31.2■■■□□ 2.59
SNRPA1P09661 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SNRPA1P09661 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
SNRPA1P09661 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC31.2■■■□□ 2.59
SNRPA1P09661 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
SNRPA1P09661 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SNRPA1P09661 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
SNRPA1P09661 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SNRPA1P09661 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SNRPA1P09661 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
SNRPA1P09661 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SNRPA1P09661 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SNRPA1P09661 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
SNRPA1P09661 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SNRPA1P09661 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
SNRPA1P09661 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SNRPA1P09661 AC142086.6-201ENST00000621154 1765 ntBASIC31.17■■■□□ 2.58
SNRPA1P09661 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SNRPA1P09661 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SNRPA1P09661 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SNRPA1P09661 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
SNRPA1P09661 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
SNRPA1P09661 KRT18P10-201ENST00000388836 1287 ntBASIC31.16■■■□□ 2.58
SNRPA1P09661 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SNRPA1P09661 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC31.16■■■□□ 2.58
SNRPA1P09661 AL031848.2-201ENST00000607670 837 ntBASIC31.16■■■□□ 2.58
SNRPA1P09661 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
SNRPA1P09661 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
SNRPA1P09661 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC31.14■■■□□ 2.58
SNRPA1P09661 PRTG-204ENST00000561292 833 ntTSL 3 BASIC31.14■■■□□ 2.58
SNRPA1P09661 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SNRPA1P09661 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
SNRPA1P09661 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC31.14■■■□□ 2.58
SNRPA1P09661 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
SNRPA1P09661 AP004609.3-201ENST00000610705 1884 ntBASIC31.14■■■□□ 2.58
SNRPA1P09661 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SNRPA1P09661 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
SNRPA1P09661 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC31.13■■■□□ 2.57
SNRPA1P09661 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.13■■■□□ 2.57
SNRPA1P09661 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC31.13■■■□□ 2.57
SNRPA1P09661 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.12■■■□□ 2.57
SNRPA1P09661 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SNRPA1P09661 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.12■■■□□ 2.57
SNRPA1P09661 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
SNRPA1P09661 HES6-204ENST00000409182 863 ntTSL 2 BASIC31.11■■■□□ 2.57
SNRPA1P09661 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC31.1■■■□□ 2.57
SNRPA1P09661 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SNRPA1P09661 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
SNRPA1P09661 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SNRPA1P09661 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
SNRPA1P09661 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC31.09■■■□□ 2.57
SNRPA1P09661 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SNRPA1P09661 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SNRPA1P09661 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
SNRPA1P09661 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC31.09■■■□□ 2.57
SNRPA1P09661 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SNRPA1P09661 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SNRPA1P09661 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.08■■■□□ 2.57
SNRPA1P09661 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
SNRPA1P09661 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC31.08■■■□□ 2.57
SNRPA1P09661 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC31.07■■■□□ 2.56
SNRPA1P09661 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC31.07■■■□□ 2.56
SNRPA1P09661 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
SNRPA1P09661 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
SNRPA1P09661 OR2A1-AS1-204ENST00000470435 602 ntBASIC31.07■■■□□ 2.56
SNRPA1P09661 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.06■■■□□ 2.56
SNRPA1P09661 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 1724.3 ms