Protein–RNA interactions for Protein: P08294

SOD3, Extracellular superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3P08294 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.84■□□□□ 0.93
SOD3P08294 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
SOD3P08294 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.84■□□□□ 0.93
SOD3P08294 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SOD3P08294 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SOD3P08294 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
SOD3P08294 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SOD3P08294 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SOD3P08294 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SOD3P08294 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SOD3P08294 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SOD3P08294 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SOD3P08294 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SOD3P08294 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SOD3P08294 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SOD3P08294 AC009299.2-201ENST00000482477 511 ntBASIC20.82■□□□□ 0.92
SOD3P08294 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SOD3P08294 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SOD3P08294 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SOD3P08294 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SOD3P08294 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOD3P08294 AL449106.1-201ENST00000608517 1980 ntBASIC20.81■□□□□ 0.92
SOD3P08294 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SOD3P08294 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SOD3P08294 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SOD3P08294 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.81■□□□□ 0.92
SOD3P08294 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOD3P08294 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.81■□□□□ 0.92
SOD3P08294 MIR4508-201ENST00000584178 70 ntBASIC20.81■□□□□ 0.92
SOD3P08294 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.81■□□□□ 0.92
SOD3P08294 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SOD3P08294 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOD3P08294 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SOD3P08294 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOD3P08294 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOD3P08294 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.8■□□□□ 0.92
SOD3P08294 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.8■□□□□ 0.92
SOD3P08294 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SOD3P08294 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOD3P08294 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOD3P08294 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOD3P08294 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
SOD3P08294 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.79■□□□□ 0.92
SOD3P08294 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.79■□□□□ 0.92
SOD3P08294 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOD3P08294 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOD3P08294 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.78■□□□□ 0.92
SOD3P08294 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOD3P08294 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOD3P08294 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SOD3P08294 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SOD3P08294 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
SOD3P08294 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOD3P08294 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
SOD3P08294 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOD3P08294 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOD3P08294 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.77■□□□□ 0.92
SOD3P08294 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SOD3P08294 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SOD3P08294 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOD3P08294 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOD3P08294 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
SOD3P08294 LINC01003-201ENST00000564834 1764 ntBASIC20.77■□□□□ 0.91
SOD3P08294 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SOD3P08294 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SOD3P08294 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SOD3P08294 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.76■□□□□ 0.91
SOD3P08294 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.76■□□□□ 0.91
SOD3P08294 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SOD3P08294 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SOD3P08294 AC087393.1-201ENST00000582896 145 ntBASIC20.75■□□□□ 0.91
SOD3P08294 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SOD3P08294 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SOD3P08294 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SOD3P08294 AC103724.3-201ENST00000564481 992 ntBASIC20.74■□□□□ 0.91
SOD3P08294 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SOD3P08294 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.73■□□□□ 0.91
SOD3P08294 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOD3P08294 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOD3P08294 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOD3P08294 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOD3P08294 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOD3P08294 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOD3P08294 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.73■□□□□ 0.91
SOD3P08294 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SOD3P08294 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SOD3P08294 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SOD3P08294 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SOD3P08294 RPS2P7-201ENST00000447334 885 ntBASIC20.72■□□□□ 0.91
SOD3P08294 AC019171.1-201ENST00000601251 1056 ntBASIC20.72■□□□□ 0.91
SOD3P08294 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SOD3P08294 AL031848.2-201ENST00000607670 837 ntBASIC20.72■□□□□ 0.91
SOD3P08294 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SOD3P08294 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SOD3P08294 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.71■□□□□ 0.91
SOD3P08294 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SOD3P08294 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.71■□□□□ 0.91
SOD3P08294 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SOD3P08294 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SOD3P08294 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms