Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 ERN1-208ENST00000606895 2068 ntBASIC26.12■■□□□ 1.77
HLA-DRAP01903 AC026202.3-201ENST00000600805 1127 ntBASIC26.12■■□□□ 1.77
HLA-DRAP01903 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
HLA-DRAP01903 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
HLA-DRAP01903 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
HLA-DRAP01903 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
HLA-DRAP01903 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.11■■□□□ 1.77
HLA-DRAP01903 RAP2CP1-202ENST00000605179 643 ntBASIC26.11■■□□□ 1.77
HLA-DRAP01903 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
HLA-DRAP01903 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.11■■□□□ 1.77
HLA-DRAP01903 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
HLA-DRAP01903 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
HLA-DRAP01903 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
HLA-DRAP01903 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
HLA-DRAP01903 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
HLA-DRAP01903 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
HLA-DRAP01903 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
HLA-DRAP01903 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
HLA-DRAP01903 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.1■■□□□ 1.77
HLA-DRAP01903 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.1■■□□□ 1.77
HLA-DRAP01903 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
HLA-DRAP01903 AC009831.1-201ENST00000580420 1582 ntBASIC26.09■■□□□ 1.77
HLA-DRAP01903 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
HLA-DRAP01903 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.09■■□□□ 1.77
HLA-DRAP01903 AC145676.1-201ENST00000514988 2004 ntBASIC26.09■■□□□ 1.77
HLA-DRAP01903 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.08■■□□□ 1.77
HLA-DRAP01903 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.08■■□□□ 1.77
HLA-DRAP01903 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
HLA-DRAP01903 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
HLA-DRAP01903 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
HLA-DRAP01903 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
HLA-DRAP01903 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
HLA-DRAP01903 DUSP8P4-201ENST00000399538 1761 ntBASIC26.07■■□□□ 1.76
HLA-DRAP01903 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.07■■□□□ 1.76
HLA-DRAP01903 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
HLA-DRAP01903 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
HLA-DRAP01903 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
HLA-DRAP01903 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
HLA-DRAP01903 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
HLA-DRAP01903 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
HLA-DRAP01903 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
HLA-DRAP01903 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
HLA-DRAP01903 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.05■■□□□ 1.76
HLA-DRAP01903 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
HLA-DRAP01903 AC133552.2-201ENST00000619106 1032 ntBASIC26.05■■□□□ 1.76
HLA-DRAP01903 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.05■■□□□ 1.76
HLA-DRAP01903 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
HLA-DRAP01903 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
HLA-DRAP01903 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
HLA-DRAP01903 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
HLA-DRAP01903 AC010501.1-201ENST00000606270 1962 ntBASIC26.04■■□□□ 1.76
HLA-DRAP01903 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
HLA-DRAP01903 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
HLA-DRAP01903 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
HLA-DRAP01903 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
HLA-DRAP01903 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.02■■□□□ 1.76
HLA-DRAP01903 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.02■■□□□ 1.76
HLA-DRAP01903 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.02■■□□□ 1.76
HLA-DRAP01903 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HLA-DRAP01903 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.02■■□□□ 1.76
HLA-DRAP01903 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HLA-DRAP01903 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.02■■□□□ 1.76
HLA-DRAP01903 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
HLA-DRAP01903 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
HLA-DRAP01903 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.01■■□□□ 1.75
HLA-DRAP01903 ABHD17AP5-201ENST00000580133 923 ntBASIC26.01■■□□□ 1.75
HLA-DRAP01903 U85056.1-201ENST00000616429 682 ntBASIC26.01■■□□□ 1.75
HLA-DRAP01903 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
HLA-DRAP01903 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.01■■□□□ 1.75
HLA-DRAP01903 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
HLA-DRAP01903 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
HLA-DRAP01903 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
HLA-DRAP01903 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
HLA-DRAP01903 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26■■□□□ 1.75
HLA-DRAP01903 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26■■□□□ 1.75
HLA-DRAP01903 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.99■■□□□ 1.75
HLA-DRAP01903 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.99■■□□□ 1.75
HLA-DRAP01903 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
HLA-DRAP01903 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HLA-DRAP01903 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
HLA-DRAP01903 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
HLA-DRAP01903 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
HLA-DRAP01903 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
HLA-DRAP01903 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.98■■□□□ 1.75
HLA-DRAP01903 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.98■■□□□ 1.75
HLA-DRAP01903 AC096887.2-201ENST00000623443 1957 ntBASIC25.98■■□□□ 1.75
HLA-DRAP01903 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
HLA-DRAP01903 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.97■■□□□ 1.75
HLA-DRAP01903 AL592293.1-201ENST00000502889 1188 ntBASIC25.97■■□□□ 1.75
HLA-DRAP01903 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.97■■□□□ 1.75
HLA-DRAP01903 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
HLA-DRAP01903 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HLA-DRAP01903 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
HLA-DRAP01903 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
HLA-DRAP01903 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
HLA-DRAP01903 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.75
HLA-DRAP01903 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
HLA-DRAP01903 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
HLA-DRAP01903 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
HLA-DRAP01903 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms