Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN1O95832 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CLDN1O95832 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.64■■□□□ 1.05
CLDN1O95832 KRT16P3-201ENST00000439127 1283 ntBASIC21.64■■□□□ 1.05
CLDN1O95832 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.64■■□□□ 1.05
CLDN1O95832 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN1O95832 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN1O95832 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN1O95832 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CLDN1O95832 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN1O95832 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN1O95832 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN1O95832 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CLDN1O95832 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.63■■□□□ 1.05
CLDN1O95832 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.63■■□□□ 1.05
CLDN1O95832 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN1O95832 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.62■■□□□ 1.05
CLDN1O95832 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.62■■□□□ 1.05
CLDN1O95832 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN1O95832 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN1O95832 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN1O95832 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.61■■□□□ 1.05
CLDN1O95832 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.61■■□□□ 1.05
CLDN1O95832 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CLDN1O95832 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
CLDN1O95832 AC087393.1-201ENST00000582896 145 ntBASIC21.6■■□□□ 1.05
CLDN1O95832 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.59■■□□□ 1.05
CLDN1O95832 AC100797.4-201ENST00000631653 1827 ntBASIC21.59■■□□□ 1.05
CLDN1O95832 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN1O95832 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN1O95832 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN1O95832 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLDN1O95832 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLDN1O95832 BX664725.1-201ENST00000438252 379 ntBASIC21.58■■□□□ 1.05
CLDN1O95832 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.58■■□□□ 1.05
CLDN1O95832 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CLDN1O95832 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLDN1O95832 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLDN1O95832 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLDN1O95832 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.57■■□□□ 1.04
CLDN1O95832 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLDN1O95832 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLDN1O95832 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLDN1O95832 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLDN1O95832 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
CLDN1O95832 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.56■■□□□ 1.04
CLDN1O95832 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.56■■□□□ 1.04
CLDN1O95832 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.56■■□□□ 1.04
CLDN1O95832 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.56■■□□□ 1.04
CLDN1O95832 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN1O95832 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.55■■□□□ 1.04
CLDN1O95832 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CLDN1O95832 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CLDN1O95832 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN1O95832 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLDN1O95832 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.54■■□□□ 1.04
CLDN1O95832 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLDN1O95832 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLDN1O95832 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CLDN1O95832 AC092666.2-201ENST00000613287 246 ntBASIC21.54■■□□□ 1.04
CLDN1O95832 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLDN1O95832 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.53■■□□□ 1.04
CLDN1O95832 AC131281.2-201ENST00000520478 145 ntBASIC21.53■■□□□ 1.04
CLDN1O95832 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CLDN1O95832 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CLDN1O95832 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.52■■□□□ 1.04
CLDN1O95832 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.52■■□□□ 1.04
CLDN1O95832 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.52■■□□□ 1.04
CLDN1O95832 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.52■■□□□ 1.04
CLDN1O95832 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.52■■□□□ 1.04
CLDN1O95832 AP004833.2-201ENST00000532228 1454 ntBASIC21.52■■□□□ 1.03
CLDN1O95832 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN1O95832 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN1O95832 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN1O95832 TSPY9P-201ENST00000440215 945 ntBASIC21.51■■□□□ 1.03
CLDN1O95832 TSPY11P-201ENST00000442607 1045 ntBASIC21.51■■□□□ 1.03
CLDN1O95832 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN1O95832 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CLDN1O95832 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.51■■□□□ 1.03
CLDN1O95832 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.51■■□□□ 1.03
CLDN1O95832 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN1O95832 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CLDN1O95832 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.5■■□□□ 1.03
CLDN1O95832 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN1O95832 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CLDN1O95832 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.49■■□□□ 1.03
CLDN1O95832 AL359504.2-201ENST00000605506 1601 ntBASIC21.49■■□□□ 1.03
CLDN1O95832 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CLDN1O95832 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLDN1O95832 RPS2P7-201ENST00000447334 885 ntBASIC21.49■■□□□ 1.03
CLDN1O95832 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.49■■□□□ 1.03
CLDN1O95832 AC005837.3-201ENST00000612163 286 ntBASIC21.49■■□□□ 1.03
CLDN1O95832 AC110285.6-201ENST00000617652 491 ntBASIC21.49■■□□□ 1.03
CLDN1O95832 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CLDN1O95832 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLDN1O95832 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLDN1O95832 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLDN1O95832 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
CLDN1O95832 AL136116.3-201ENST00000402907 1138 ntBASIC21.48■■□□□ 1.03
CLDN1O95832 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms