Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH7O60245 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDH7O60245 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDH7O60245 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH7O60245 AL157400.5-201ENST00000507624 621 ntBASIC23.1■■□□□ 1.29
PCDH7O60245 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH7O60245 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH7O60245 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDH7O60245 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH7O60245 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
PCDH7O60245 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
PCDH7O60245 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH7O60245 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH7O60245 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
PCDH7O60245 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH7O60245 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDH7O60245 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH7O60245 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
PCDH7O60245 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDH7O60245 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDH7O60245 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDH7O60245 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDH7O60245 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDH7O60245 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH7O60245 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDH7O60245 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH7O60245 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH7O60245 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH7O60245 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH7O60245 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH7O60245 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
PCDH7O60245 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.06■■□□□ 1.28
PCDH7O60245 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH7O60245 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
PCDH7O60245 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH7O60245 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH7O60245 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH7O60245 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.05■■□□□ 1.28
PCDH7O60245 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
PCDH7O60245 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDH7O60245 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH7O60245 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDH7O60245 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH7O60245 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH7O60245 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDH7O60245 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDH7O60245 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDH7O60245 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
PCDH7O60245 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH7O60245 AC096887.2-201ENST00000623443 1957 ntBASIC23.03■■□□□ 1.28
PCDH7O60245 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDH7O60245 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDH7O60245 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH7O60245 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH7O60245 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDH7O60245 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH7O60245 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH7O60245 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH7O60245 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH7O60245 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH7O60245 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH7O60245 AC025884.2-201ENST00000553429 711 ntBASIC23.01■■□□□ 1.27
PCDH7O60245 AC092296.2-201ENST00000589470 999 ntBASIC23.01■■□□□ 1.27
PCDH7O60245 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH7O60245 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH7O60245 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH7O60245 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23■■□□□ 1.27
PCDH7O60245 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23■■□□□ 1.27
PCDH7O60245 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PCDH7O60245 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23■■□□□ 1.27
PCDH7O60245 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
PCDH7O60245 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
PCDH7O60245 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH7O60245 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.99■■□□□ 1.27
PCDH7O60245 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.99■■□□□ 1.27
PCDH7O60245 AC022413.1-201ENST00000624602 984 ntBASIC22.99■■□□□ 1.27
PCDH7O60245 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.99■■□□□ 1.27
PCDH7O60245 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDH7O60245 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH7O60245 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.98■■□□□ 1.27
PCDH7O60245 MIR4449-201ENST00000578365 66 ntBASIC22.98■■□□□ 1.27
PCDH7O60245 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH7O60245 MIR3960-201ENST00000583311 91 ntBASIC22.97■■□□□ 1.27
PCDH7O60245 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH7O60245 SMPD5-203ENST00000639008 1464 ntBASIC22.97■■□□□ 1.27
PCDH7O60245 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.97■■□□□ 1.27
PCDH7O60245 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
PCDH7O60245 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.96■■□□□ 1.27
PCDH7O60245 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH7O60245 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
PCDH7O60245 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDH7O60245 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.95■■□□□ 1.26
PCDH7O60245 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDH7O60245 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDH7O60245 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDH7O60245 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
PCDH7O60245 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH7O60245 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.94■■□□□ 1.26
PCDH7O60245 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.94■■□□□ 1.26
PCDH7O60245 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms