Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.26■□□□□ 0.83
RNF223E7ERA6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
RNF223E7ERA6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.26■□□□□ 0.83
RNF223E7ERA6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.26■□□□□ 0.83
RNF223E7ERA6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF223E7ERA6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF223E7ERA6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF223E7ERA6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF223E7ERA6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RNF223E7ERA6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RNF223E7ERA6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RNF223E7ERA6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.25■□□□□ 0.83
RNF223E7ERA6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF223E7ERA6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF223E7ERA6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF223E7ERA6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF223E7ERA6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF223E7ERA6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.24■□□□□ 0.83
RNF223E7ERA6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF223E7ERA6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF223E7ERA6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
RNF223E7ERA6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF223E7ERA6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF223E7ERA6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF223E7ERA6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
RNF223E7ERA6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF223E7ERA6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF223E7ERA6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF223E7ERA6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.22■□□□□ 0.83
RNF223E7ERA6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF223E7ERA6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF223E7ERA6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RNF223E7ERA6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF223E7ERA6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RNF223E7ERA6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
RNF223E7ERA6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF223E7ERA6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF223E7ERA6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF223E7ERA6 KRT16P3-201ENST00000439127 1283 ntBASIC20.21■□□□□ 0.83
RNF223E7ERA6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF223E7ERA6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF223E7ERA6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF223E7ERA6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.83
RNF223E7ERA6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF223E7ERA6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF223E7ERA6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RNF223E7ERA6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF223E7ERA6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF223E7ERA6 UNC93B8-201ENST00000511903 705 ntBASIC20.2■□□□□ 0.82
RNF223E7ERA6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF223E7ERA6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF223E7ERA6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF223E7ERA6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF223E7ERA6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF223E7ERA6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF223E7ERA6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF223E7ERA6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.19■□□□□ 0.82
RNF223E7ERA6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF223E7ERA6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF223E7ERA6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF223E7ERA6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
RNF223E7ERA6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.18■□□□□ 0.82
RNF223E7ERA6 AC022616.5-201ENST00000518796 181 ntBASIC20.18■□□□□ 0.82
RNF223E7ERA6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.18■□□□□ 0.82
RNF223E7ERA6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF223E7ERA6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
RNF223E7ERA6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF223E7ERA6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
RNF223E7ERA6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF223E7ERA6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF223E7ERA6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.17■□□□□ 0.82
RNF223E7ERA6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.17■□□□□ 0.82
RNF223E7ERA6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF223E7ERA6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.17■□□□□ 0.82
RNF223E7ERA6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF223E7ERA6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF223E7ERA6 TSPY9P-201ENST00000440215 945 ntBASIC20.16■□□□□ 0.82
RNF223E7ERA6 TSPY11P-201ENST00000442607 1045 ntBASIC20.16■□□□□ 0.82
RNF223E7ERA6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF223E7ERA6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
RNF223E7ERA6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF223E7ERA6 KRT18P10-201ENST00000388836 1287 ntBASIC20.15■□□□□ 0.82
RNF223E7ERA6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF223E7ERA6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF223E7ERA6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RNF223E7ERA6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF223E7ERA6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF223E7ERA6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF223E7ERA6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF223E7ERA6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RNF223E7ERA6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF223E7ERA6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF223E7ERA6 KRT18P24-201ENST00000344739 1156 ntBASIC20.13■□□□□ 0.81
RNF223E7ERA6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF223E7ERA6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF223E7ERA6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF223E7ERA6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF223E7ERA6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF223E7ERA6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF223E7ERA6 ABCB10P1-201ENST00000614297 2181 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms