Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCP4L1A6NKN8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCP4L1A6NKN8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCP4L1A6NKN8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCP4L1A6NKN8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCP4L1A6NKN8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCP4L1A6NKN8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
PCP4L1A6NKN8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCP4L1A6NKN8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCP4L1A6NKN8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCP4L1A6NKN8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCP4L1A6NKN8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCP4L1A6NKN8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCP4L1A6NKN8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PCP4L1A6NKN8 C1orf229-201ENST00000623686 2258 ntBASIC19.18■□□□□ 0.66
PCP4L1A6NKN8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCP4L1A6NKN8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCP4L1A6NKN8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.18■□□□□ 0.66
PCP4L1A6NKN8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCP4L1A6NKN8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.17■□□□□ 0.66
PCP4L1A6NKN8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCP4L1A6NKN8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.17■□□□□ 0.66
PCP4L1A6NKN8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCP4L1A6NKN8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCP4L1A6NKN8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCP4L1A6NKN8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCP4L1A6NKN8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCP4L1A6NKN8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCP4L1A6NKN8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PCP4L1A6NKN8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCP4L1A6NKN8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCP4L1A6NKN8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCP4L1A6NKN8 BX255925.1-201ENST00000566954 1854 ntBASIC19.16■□□□□ 0.66
PCP4L1A6NKN8 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PCP4L1A6NKN8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCP4L1A6NKN8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.15■□□□□ 0.66
PCP4L1A6NKN8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCP4L1A6NKN8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.15■□□□□ 0.66
PCP4L1A6NKN8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCP4L1A6NKN8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PCP4L1A6NKN8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCP4L1A6NKN8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCP4L1A6NKN8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCP4L1A6NKN8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCP4L1A6NKN8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PCP4L1A6NKN8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCP4L1A6NKN8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PCP4L1A6NKN8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCP4L1A6NKN8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
PCP4L1A6NKN8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCP4L1A6NKN8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCP4L1A6NKN8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCP4L1A6NKN8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCP4L1A6NKN8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCP4L1A6NKN8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCP4L1A6NKN8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCP4L1A6NKN8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCP4L1A6NKN8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PCP4L1A6NKN8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCP4L1A6NKN8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCP4L1A6NKN8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCP4L1A6NKN8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCP4L1A6NKN8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCP4L1A6NKN8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCP4L1A6NKN8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCP4L1A6NKN8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.11■□□□□ 0.65
PCP4L1A6NKN8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCP4L1A6NKN8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCP4L1A6NKN8 AF106564.1-201ENST00000607058 2553 ntBASIC19.1■□□□□ 0.65
PCP4L1A6NKN8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCP4L1A6NKN8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCP4L1A6NKN8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PCP4L1A6NKN8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCP4L1A6NKN8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCP4L1A6NKN8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PCP4L1A6NKN8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCP4L1A6NKN8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PCP4L1A6NKN8 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCP4L1A6NKN8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCP4L1A6NKN8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCP4L1A6NKN8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.09■□□□□ 0.65
PCP4L1A6NKN8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCP4L1A6NKN8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCP4L1A6NKN8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCP4L1A6NKN8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCP4L1A6NKN8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCP4L1A6NKN8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCP4L1A6NKN8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.08■□□□□ 0.65
PCP4L1A6NKN8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.08■□□□□ 0.65
PCP4L1A6NKN8 AC138932.1-201ENST00000534164 6830 ntBASIC19.08■□□□□ 0.64
PCP4L1A6NKN8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCP4L1A6NKN8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.08■□□□□ 0.64
PCP4L1A6NKN8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCP4L1A6NKN8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
PCP4L1A6NKN8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCP4L1A6NKN8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.07■□□□□ 0.64
PCP4L1A6NKN8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCP4L1A6NKN8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PCP4L1A6NKN8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCP4L1A6NKN8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms