Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAV10A0A0B4J240 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV10A0A0B4J240 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV10A0A0B4J240 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV10A0A0B4J240 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV10A0A0B4J240 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.07■□□□□ 0.32
TRAV10A0A0B4J240 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV10A0A0B4J240 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRAV10A0A0B4J240 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRAV10A0A0B4J240 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV10A0A0B4J240 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV10A0A0B4J240 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV10A0A0B4J240 RPS2P7-201ENST00000447334 885 ntBASIC17.06■□□□□ 0.32
TRAV10A0A0B4J240 AC087393.1-201ENST00000582896 145 ntBASIC17.06■□□□□ 0.32
TRAV10A0A0B4J240 MIR4508-201ENST00000584178 70 ntBASIC17.06■□□□□ 0.32
TRAV10A0A0B4J240 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV10A0A0B4J240 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV10A0A0B4J240 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRAV10A0A0B4J240 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV10A0A0B4J240 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRAV10A0A0B4J240 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV10A0A0B4J240 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV10A0A0B4J240 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRAV10A0A0B4J240 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRAV10A0A0B4J240 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV10A0A0B4J240 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV10A0A0B4J240 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV10A0A0B4J240 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV10A0A0B4J240 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV10A0A0B4J240 AL451085.2-201ENST00000605085 799 ntBASIC17.05■□□□□ 0.32
TRAV10A0A0B4J240 AL035685.1-201ENST00000636663 812 ntBASIC17.05■□□□□ 0.32
TRAV10A0A0B4J240 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV10A0A0B4J240 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
TRAV10A0A0B4J240 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV10A0A0B4J240 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV10A0A0B4J240 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV10A0A0B4J240 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV10A0A0B4J240 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV10A0A0B4J240 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.04■□□□□ 0.32
TRAV10A0A0B4J240 AC019171.1-201ENST00000601251 1056 ntBASIC17.04■□□□□ 0.32
TRAV10A0A0B4J240 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
TRAV10A0A0B4J240 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV10A0A0B4J240 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV10A0A0B4J240 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV10A0A0B4J240 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV10A0A0B4J240 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV10A0A0B4J240 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV10A0A0B4J240 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.03■□□□□ 0.32
TRAV10A0A0B4J240 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV10A0A0B4J240 PVT1_1.1-201ENST00000615125 194 ntBASIC17.03■□□□□ 0.32
TRAV10A0A0B4J240 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV10A0A0B4J240 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV10A0A0B4J240 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
TRAV10A0A0B4J240 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV10A0A0B4J240 AP004609.3-201ENST00000610705 1884 ntBASIC17.02■□□□□ 0.32
TRAV10A0A0B4J240 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.02■□□□□ 0.32
TRAV10A0A0B4J240 AC103834.1-201ENST00000520383 144 ntBASIC17.02■□□□□ 0.32
TRAV10A0A0B4J240 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TRAV10A0A0B4J240 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV10A0A0B4J240 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV10A0A0B4J240 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.01■□□□□ 0.31
TRAV10A0A0B4J240 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
TRAV10A0A0B4J240 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV10A0A0B4J240 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV10A0A0B4J240 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV10A0A0B4J240 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRAV10A0A0B4J240 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV10A0A0B4J240 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17■□□□□ 0.31
TRAV10A0A0B4J240 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV10A0A0B4J240 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRAV10A0A0B4J240 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV10A0A0B4J240 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17■□□□□ 0.31
TRAV10A0A0B4J240 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRAV10A0A0B4J240 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17■□□□□ 0.31
TRAV10A0A0B4J240 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV10A0A0B4J240 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAV10A0A0B4J240 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV10A0A0B4J240 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV10A0A0B4J240 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV10A0A0B4J240 AL031848.2-201ENST00000607670 837 ntBASIC16.99■□□□□ 0.31
TRAV10A0A0B4J240 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV10A0A0B4J240 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV10A0A0B4J240 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV10A0A0B4J240 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV10A0A0B4J240 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV10A0A0B4J240 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV10A0A0B4J240 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV10A0A0B4J240 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV10A0A0B4J240 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV10A0A0B4J240 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV10A0A0B4J240 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV10A0A0B4J240 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TRAV10A0A0B4J240 LONRF2P2-201ENST00000439212 571 ntBASIC16.97■□□□□ 0.31
TRAV10A0A0B4J240 AC009299.2-201ENST00000482477 511 ntBASIC16.97■□□□□ 0.31
TRAV10A0A0B4J240 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV10A0A0B4J240 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV10A0A0B4J240 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV10A0A0B4J240 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV10A0A0B4J240 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV10A0A0B4J240 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms