Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV2A0A0B4J234 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV2A0A0B4J234 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV2A0A0B4J234 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV2A0A0B4J234 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV2A0A0B4J234 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRAV2A0A0B4J234 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV2A0A0B4J234 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV2A0A0B4J234 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV2A0A0B4J234 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV2A0A0B4J234 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV2A0A0B4J234 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV2A0A0B4J234 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV2A0A0B4J234 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV2A0A0B4J234 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV2A0A0B4J234 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV2A0A0B4J234 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRAV2A0A0B4J234 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRAV2A0A0B4J234 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV2A0A0B4J234 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV2A0A0B4J234 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV2A0A0B4J234 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV2A0A0B4J234 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV2A0A0B4J234 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAV2A0A0B4J234 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAV2A0A0B4J234 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV2A0A0B4J234 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV2A0A0B4J234 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.18■□□□□ 0.5
TRAV2A0A0B4J234 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV2A0A0B4J234 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TRAV2A0A0B4J234 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV2A0A0B4J234 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV2A0A0B4J234 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV2A0A0B4J234 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV2A0A0B4J234 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV2A0A0B4J234 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV2A0A0B4J234 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV2A0A0B4J234 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV2A0A0B4J234 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV2A0A0B4J234 RARRES2P2-201ENST00000394842 485 ntBASIC18.17■□□□□ 0.5
TRAV2A0A0B4J234 AC093536.1-201ENST00000569153 554 ntBASIC18.17■□□□□ 0.5
TRAV2A0A0B4J234 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV2A0A0B4J234 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV2A0A0B4J234 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV2A0A0B4J234 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV2A0A0B4J234 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRAV2A0A0B4J234 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRAV2A0A0B4J234 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV2A0A0B4J234 AC092803.2-201ENST00000564287 1899 ntBASIC18.16■□□□□ 0.5
TRAV2A0A0B4J234 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV2A0A0B4J234 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV2A0A0B4J234 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.16■□□□□ 0.5
TRAV2A0A0B4J234 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.16■□□□□ 0.5
TRAV2A0A0B4J234 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV2A0A0B4J234 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV2A0A0B4J234 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
TRAV2A0A0B4J234 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV2A0A0B4J234 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV2A0A0B4J234 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV2A0A0B4J234 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.14■□□□□ 0.5
TRAV2A0A0B4J234 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV2A0A0B4J234 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAV2A0A0B4J234 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.14■□□□□ 0.49
TRAV2A0A0B4J234 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TRAV2A0A0B4J234 AC145676.1-201ENST00000514988 2004 ntBASIC18.14■□□□□ 0.49
TRAV2A0A0B4J234 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV2A0A0B4J234 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV2A0A0B4J234 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRAV2A0A0B4J234 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV2A0A0B4J234 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TRAV2A0A0B4J234 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAV2A0A0B4J234 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV2A0A0B4J234 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAV2A0A0B4J234 DUSP8P4-201ENST00000399538 1761 ntBASIC18.13■□□□□ 0.49
TRAV2A0A0B4J234 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRAV2A0A0B4J234 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV2A0A0B4J234 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV2A0A0B4J234 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
TRAV2A0A0B4J234 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV2A0A0B4J234 RAP2CP1-202ENST00000605179 643 ntBASIC18.12■□□□□ 0.49
TRAV2A0A0B4J234 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TRAV2A0A0B4J234 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TRAV2A0A0B4J234 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV2A0A0B4J234 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV2A0A0B4J234 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV2A0A0B4J234 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRAV2A0A0B4J234 AC091060.1-201ENST00000623524 1766 ntBASIC18.12■□□□□ 0.49
TRAV2A0A0B4J234 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV2A0A0B4J234 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRAV2A0A0B4J234 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV2A0A0B4J234 KRT18P10-201ENST00000388836 1287 ntBASIC18.11■□□□□ 0.49
TRAV2A0A0B4J234 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV2A0A0B4J234 AC026202.3-201ENST00000600805 1127 ntBASIC18.11■□□□□ 0.49
TRAV2A0A0B4J234 AC010501.1-201ENST00000606270 1962 ntBASIC18.1■□□□□ 0.49
TRAV2A0A0B4J234 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV2A0A0B4J234 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV2A0A0B4J234 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV2A0A0B4J234 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TRAV2A0A0B4J234 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAV2A0A0B4J234 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms