Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IGHV3-43A0A0B4J1X8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.03■□□□□ 0.8
IGHV3-43A0A0B4J1X8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IGHV3-43A0A0B4J1X8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
IGHV3-43A0A0B4J1X8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
IGHV3-43A0A0B4J1X8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.02■□□□□ 0.8
IGHV3-43A0A0B4J1X8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.02■□□□□ 0.8
IGHV3-43A0A0B4J1X8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IGHV3-43A0A0B4J1X8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IGHV3-43A0A0B4J1X8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
IGHV3-43A0A0B4J1X8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.02■□□□□ 0.79
IGHV3-43A0A0B4J1X8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
IGHV3-43A0A0B4J1X8 AC010501.1-201ENST00000606270 1962 ntBASIC20.01■□□□□ 0.79
IGHV3-43A0A0B4J1X8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IGHV3-43A0A0B4J1X8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IGHV3-43A0A0B4J1X8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IGHV3-43A0A0B4J1X8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IGHV3-43A0A0B4J1X8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.01■□□□□ 0.79
IGHV3-43A0A0B4J1X8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IGHV3-43A0A0B4J1X8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
IGHV3-43A0A0B4J1X8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20■□□□□ 0.79
IGHV3-43A0A0B4J1X8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20■□□□□ 0.79
IGHV3-43A0A0B4J1X8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
IGHV3-43A0A0B4J1X8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IGHV3-43A0A0B4J1X8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20■□□□□ 0.79
IGHV3-43A0A0B4J1X8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
IGHV3-43A0A0B4J1X8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
IGHV3-43A0A0B4J1X8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
IGHV3-43A0A0B4J1X8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
IGHV3-43A0A0B4J1X8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
IGHV3-43A0A0B4J1X8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
IGHV3-43A0A0B4J1X8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
IGHV3-43A0A0B4J1X8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.99■□□□□ 0.79
IGHV3-43A0A0B4J1X8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
IGHV3-43A0A0B4J1X8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
IGHV3-43A0A0B4J1X8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
IGHV3-43A0A0B4J1X8 AC060814.1-201ENST00000554326 538 ntBASIC19.98■□□□□ 0.79
IGHV3-43A0A0B4J1X8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.98■□□□□ 0.79
IGHV3-43A0A0B4J1X8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
IGHV3-43A0A0B4J1X8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IGHV3-43A0A0B4J1X8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
IGHV3-43A0A0B4J1X8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
IGHV3-43A0A0B4J1X8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
IGHV3-43A0A0B4J1X8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.96■□□□□ 0.79
IGHV3-43A0A0B4J1X8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IGHV3-43A0A0B4J1X8 AL157400.5-201ENST00000507624 621 ntBASIC19.96■□□□□ 0.79
IGHV3-43A0A0B4J1X8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.96■□□□□ 0.79
IGHV3-43A0A0B4J1X8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.96■□□□□ 0.79
IGHV3-43A0A0B4J1X8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
IGHV3-43A0A0B4J1X8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IGHV3-43A0A0B4J1X8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IGHV3-43A0A0B4J1X8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IGHV3-43A0A0B4J1X8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
IGHV3-43A0A0B4J1X8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IGHV3-43A0A0B4J1X8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
IGHV3-43A0A0B4J1X8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
IGHV3-43A0A0B4J1X8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
IGHV3-43A0A0B4J1X8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IGHV3-43A0A0B4J1X8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IGHV3-43A0A0B4J1X8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IGHV3-43A0A0B4J1X8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IGHV3-43A0A0B4J1X8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
IGHV3-43A0A0B4J1X8 AC135731.1-201ENST00000569415 2548 ntBASIC19.95■□□□□ 0.78
IGHV3-43A0A0B4J1X8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
IGHV3-43A0A0B4J1X8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
IGHV3-43A0A0B4J1X8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
IGHV3-43A0A0B4J1X8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
IGHV3-43A0A0B4J1X8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IGHV3-43A0A0B4J1X8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.94■□□□□ 0.78
IGHV3-43A0A0B4J1X8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IGHV3-43A0A0B4J1X8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.94■□□□□ 0.78
IGHV3-43A0A0B4J1X8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IGHV3-43A0A0B4J1X8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
IGHV3-43A0A0B4J1X8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
IGHV3-43A0A0B4J1X8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
IGHV3-43A0A0B4J1X8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IGHV3-43A0A0B4J1X8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.93■□□□□ 0.78
IGHV3-43A0A0B4J1X8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.93■□□□□ 0.78
IGHV3-43A0A0B4J1X8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IGHV3-43A0A0B4J1X8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
IGHV3-43A0A0B4J1X8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
IGHV3-43A0A0B4J1X8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
IGHV3-43A0A0B4J1X8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
IGHV3-43A0A0B4J1X8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IGHV3-43A0A0B4J1X8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
IGHV3-43A0A0B4J1X8 AC096887.2-201ENST00000623443 1957 ntBASIC19.92■□□□□ 0.78
IGHV3-43A0A0B4J1X8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.92■□□□□ 0.78
IGHV3-43A0A0B4J1X8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.92■□□□□ 0.78
IGHV3-43A0A0B4J1X8 AC022413.1-201ENST00000624602 984 ntBASIC19.92■□□□□ 0.78
IGHV3-43A0A0B4J1X8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IGHV3-43A0A0B4J1X8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
IGHV3-43A0A0B4J1X8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IGHV3-43A0A0B4J1X8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IGHV3-43A0A0B4J1X8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.91■□□□□ 0.78
IGHV3-43A0A0B4J1X8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.91■□□□□ 0.78
IGHV3-43A0A0B4J1X8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IGHV3-43A0A0B4J1X8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
IGHV3-43A0A0B4J1X8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IGHV3-43A0A0B4J1X8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.9■□□□□ 0.78
IGHV3-43A0A0B4J1X8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms