Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-8A0A0A6YYG3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRBV6-8A0A0A6YYG3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-8A0A0A6YYG3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC16.78■□□□□ 0.28
TRBV6-8A0A0A6YYG3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-8A0A0A6YYG3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-8A0A0A6YYG3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC16.78■□□□□ 0.28
TRBV6-8A0A0A6YYG3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-8A0A0A6YYG3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-8A0A0A6YYG3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-8A0A0A6YYG3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRBV6-8A0A0A6YYG3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-8A0A0A6YYG3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV6-8A0A0A6YYG3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TRBV6-8A0A0A6YYG3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC16.77■□□□□ 0.27
TRBV6-8A0A0A6YYG3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV6-8A0A0A6YYG3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.77■□□□□ 0.27
TRBV6-8A0A0A6YYG3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
TRBV6-8A0A0A6YYG3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV6-8A0A0A6YYG3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-8A0A0A6YYG3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-8A0A0A6YYG3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV6-8A0A0A6YYG3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-8A0A0A6YYG3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-8A0A0A6YYG3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-8A0A0A6YYG3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRBV6-8A0A0A6YYG3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-8A0A0A6YYG3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-8A0A0A6YYG3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRBV6-8A0A0A6YYG3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-8A0A0A6YYG3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.75■□□□□ 0.27
TRBV6-8A0A0A6YYG3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TRBV6-8A0A0A6YYG3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRBV6-8A0A0A6YYG3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-8A0A0A6YYG3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC16.75■□□□□ 0.27
TRBV6-8A0A0A6YYG3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC16.75■□□□□ 0.27
TRBV6-8A0A0A6YYG3 AC135731.1-201ENST00000569415 2548 ntBASIC16.75■□□□□ 0.27
TRBV6-8A0A0A6YYG3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRBV6-8A0A0A6YYG3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-8A0A0A6YYG3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.75■□□□□ 0.27
TRBV6-8A0A0A6YYG3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRBV6-8A0A0A6YYG3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-8A0A0A6YYG3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-8A0A0A6YYG3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC16.74■□□□□ 0.27
TRBV6-8A0A0A6YYG3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-8A0A0A6YYG3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC16.74■□□□□ 0.27
TRBV6-8A0A0A6YYG3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-8A0A0A6YYG3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-8A0A0A6YYG3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-8A0A0A6YYG3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-8A0A0A6YYG3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-8A0A0A6YYG3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
TRBV6-8A0A0A6YYG3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-8A0A0A6YYG3 AC096887.2-201ENST00000623443 1957 ntBASIC16.73■□□□□ 0.27
TRBV6-8A0A0A6YYG3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-8A0A0A6YYG3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-8A0A0A6YYG3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-8A0A0A6YYG3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC16.73■□□□□ 0.27
TRBV6-8A0A0A6YYG3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-8A0A0A6YYG3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.73■□□□□ 0.27
TRBV6-8A0A0A6YYG3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-8A0A0A6YYG3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-8A0A0A6YYG3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-8A0A0A6YYG3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-8A0A0A6YYG3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-8A0A0A6YYG3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-8A0A0A6YYG3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-8A0A0A6YYG3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.72■□□□□ 0.27
TRBV6-8A0A0A6YYG3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.72■□□□□ 0.27
TRBV6-8A0A0A6YYG3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-8A0A0A6YYG3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-8A0A0A6YYG3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-8A0A0A6YYG3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-8A0A0A6YYG3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.72■□□□□ 0.27
TRBV6-8A0A0A6YYG3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.72■□□□□ 0.27
TRBV6-8A0A0A6YYG3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-8A0A0A6YYG3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC16.71■□□□□ 0.27
TRBV6-8A0A0A6YYG3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC16.71■□□□□ 0.27
TRBV6-8A0A0A6YYG3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-8A0A0A6YYG3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-8A0A0A6YYG3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
TRBV6-8A0A0A6YYG3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-8A0A0A6YYG3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV6-8A0A0A6YYG3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRBV6-8A0A0A6YYG3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC16.7■□□□□ 0.26
TRBV6-8A0A0A6YYG3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-8A0A0A6YYG3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-8A0A0A6YYG3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-8A0A0A6YYG3 MIR639-201ENST00000384974 98 ntBASIC16.7■□□□□ 0.26
TRBV6-8A0A0A6YYG3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-8A0A0A6YYG3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC16.7■□□□□ 0.26
TRBV6-8A0A0A6YYG3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-8A0A0A6YYG3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-8A0A0A6YYG3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-8A0A0A6YYG3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRBV6-8A0A0A6YYG3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-8A0A0A6YYG3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-8A0A0A6YYG3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-8A0A0A6YYG3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-8A0A0A6YYG3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms