Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.23■□□□□ 0.83
TRBV6-7A0A0A0MS04 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV6-7A0A0A0MS04 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV6-7A0A0A0MS04 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV6-7A0A0A0MS04 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV6-7A0A0A0MS04 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV6-7A0A0A0MS04 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV6-7A0A0A0MS04 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV6-7A0A0A0MS04 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TRBV6-7A0A0A0MS04 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV6-7A0A0A0MS04 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV6-7A0A0A0MS04 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
TRBV6-7A0A0A0MS04 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV6-7A0A0A0MS04 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TRBV6-7A0A0A0MS04 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.2■□□□□ 0.82
TRBV6-7A0A0A0MS04 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRBV6-7A0A0A0MS04 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV6-7A0A0A0MS04 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV6-7A0A0A0MS04 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.2■□□□□ 0.82
TRBV6-7A0A0A0MS04 AL139125.2-201ENST00000623134 1869 ntBASIC20.2■□□□□ 0.82
TRBV6-7A0A0A0MS04 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV6-7A0A0A0MS04 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.19■□□□□ 0.82
TRBV6-7A0A0A0MS04 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV6-7A0A0A0MS04 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TRBV6-7A0A0A0MS04 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV6-7A0A0A0MS04 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV6-7A0A0A0MS04 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.19■□□□□ 0.82
TRBV6-7A0A0A0MS04 AC148477.6-201ENST00000623746 465 ntBASIC20.19■□□□□ 0.82
TRBV6-7A0A0A0MS04 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV6-7A0A0A0MS04 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV6-7A0A0A0MS04 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.18■□□□□ 0.82
TRBV6-7A0A0A0MS04 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV6-7A0A0A0MS04 MIR219A2-201ENST00000608502 1504 ntBASIC20.18■□□□□ 0.82
TRBV6-7A0A0A0MS04 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV6-7A0A0A0MS04 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV6-7A0A0A0MS04 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV6-7A0A0A0MS04 RPS2P35-201ENST00000443417 897 ntBASIC20.18■□□□□ 0.82
TRBV6-7A0A0A0MS04 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.18■□□□□ 0.82
TRBV6-7A0A0A0MS04 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.18■□□□□ 0.82
TRBV6-7A0A0A0MS04 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
TRBV6-7A0A0A0MS04 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV6-7A0A0A0MS04 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TRBV6-7A0A0A0MS04 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV6-7A0A0A0MS04 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV6-7A0A0A0MS04 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV6-7A0A0A0MS04 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
TRBV6-7A0A0A0MS04 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TRBV6-7A0A0A0MS04 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.17■□□□□ 0.82
TRBV6-7A0A0A0MS04 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV6-7A0A0A0MS04 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV6-7A0A0A0MS04 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.17■□□□□ 0.82
TRBV6-7A0A0A0MS04 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV6-7A0A0A0MS04 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.16■□□□□ 0.82
TRBV6-7A0A0A0MS04 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV6-7A0A0A0MS04 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV6-7A0A0A0MS04 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.16■□□□□ 0.82
TRBV6-7A0A0A0MS04 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV6-7A0A0A0MS04 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV6-7A0A0A0MS04 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV6-7A0A0A0MS04 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV6-7A0A0A0MS04 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TRBV6-7A0A0A0MS04 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV6-7A0A0A0MS04 DUX4L11-201ENST00000611504 1267 ntBASIC20.15■□□□□ 0.82
TRBV6-7A0A0A0MS04 DUX4L12-201ENST00000614593 1267 ntBASIC20.15■□□□□ 0.82
TRBV6-7A0A0A0MS04 DUX4L14-201ENST00000621227 1267 ntBASIC20.15■□□□□ 0.82
TRBV6-7A0A0A0MS04 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV6-7A0A0A0MS04 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TRBV6-7A0A0A0MS04 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.15■□□□□ 0.82
TRBV6-7A0A0A0MS04 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TRBV6-7A0A0A0MS04 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.14■□□□□ 0.81
TRBV6-7A0A0A0MS04 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV6-7A0A0A0MS04 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.14■□□□□ 0.81
TRBV6-7A0A0A0MS04 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV6-7A0A0A0MS04 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV6-7A0A0A0MS04 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV6-7A0A0A0MS04 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.14■□□□□ 0.81
TRBV6-7A0A0A0MS04 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV6-7A0A0A0MS04 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV6-7A0A0A0MS04 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV6-7A0A0A0MS04 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
TRBV6-7A0A0A0MS04 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV6-7A0A0A0MS04 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
TRBV6-7A0A0A0MS04 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV6-7A0A0A0MS04 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV6-7A0A0A0MS04 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV6-7A0A0A0MS04 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV6-7A0A0A0MS04 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV6-7A0A0A0MS04 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.12■□□□□ 0.81
TRBV6-7A0A0A0MS04 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV6-7A0A0A0MS04 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV6-7A0A0A0MS04 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.12■□□□□ 0.81
TRBV6-7A0A0A0MS04 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TRBV6-7A0A0A0MS04 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV6-7A0A0A0MS04 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV6-7A0A0A0MS04 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.11■□□□□ 0.81
TRBV6-7A0A0A0MS04 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.11■□□□□ 0.81
TRBV6-7A0A0A0MS04 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV6-7A0A0A0MS04 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV6-7A0A0A0MS04 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV6-7A0A0A0MS04 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms