Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV26-1A0A087WT03 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV26-1A0A087WT03 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV26-1A0A087WT03 ECEL1P2-201ENST00000461596 1295 ntBASIC17.28■□□□□ 0.36
TRAV26-1A0A087WT03 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV26-1A0A087WT03 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV26-1A0A087WT03 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV26-1A0A087WT03 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV26-1A0A087WT03 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV26-1A0A087WT03 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV26-1A0A087WT03 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV26-1A0A087WT03 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV26-1A0A087WT03 RARRES2P2-201ENST00000394842 485 ntBASIC17.27■□□□□ 0.36
TRAV26-1A0A087WT03 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV26-1A0A087WT03 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV26-1A0A087WT03 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV26-1A0A087WT03 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV26-1A0A087WT03 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRAV26-1A0A087WT03 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV26-1A0A087WT03 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV26-1A0A087WT03 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV26-1A0A087WT03 AL359504.2-201ENST00000605506 1601 ntBASIC17.26■□□□□ 0.35
TRAV26-1A0A087WT03 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV26-1A0A087WT03 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV26-1A0A087WT03 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV26-1A0A087WT03 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV26-1A0A087WT03 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV26-1A0A087WT03 AP004609.3-201ENST00000610705 1884 ntBASIC17.26■□□□□ 0.35
TRAV26-1A0A087WT03 AL121749.1-202ENST00000609313 2153 ntBASIC17.26■□□□□ 0.35
TRAV26-1A0A087WT03 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRAV26-1A0A087WT03 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV26-1A0A087WT03 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV26-1A0A087WT03 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV26-1A0A087WT03 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV26-1A0A087WT03 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
TRAV26-1A0A087WT03 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV26-1A0A087WT03 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV26-1A0A087WT03 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV26-1A0A087WT03 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV26-1A0A087WT03 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV26-1A0A087WT03 SMPD5-203ENST00000639008 1464 ntBASIC17.24■□□□□ 0.35
TRAV26-1A0A087WT03 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRAV26-1A0A087WT03 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV26-1A0A087WT03 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.23■□□□□ 0.35
TRAV26-1A0A087WT03 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.23■□□□□ 0.35
TRAV26-1A0A087WT03 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV26-1A0A087WT03 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV26-1A0A087WT03 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.22■□□□□ 0.35
TRAV26-1A0A087WT03 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV26-1A0A087WT03 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TRAV26-1A0A087WT03 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV26-1A0A087WT03 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV26-1A0A087WT03 AC142472.1-201ENST00000612013 1741 ntBASIC17.21■□□□□ 0.35
TRAV26-1A0A087WT03 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV26-1A0A087WT03 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV26-1A0A087WT03 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV26-1A0A087WT03 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV26-1A0A087WT03 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV26-1A0A087WT03 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV26-1A0A087WT03 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV26-1A0A087WT03 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV26-1A0A087WT03 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV26-1A0A087WT03 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV26-1A0A087WT03 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.19■□□□□ 0.34
TRAV26-1A0A087WT03 CLDN5-201ENST00000403084 2357 ntBASIC17.19■□□□□ 0.34
TRAV26-1A0A087WT03 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV26-1A0A087WT03 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV26-1A0A087WT03 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
TRAV26-1A0A087WT03 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV26-1A0A087WT03 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV26-1A0A087WT03 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV26-1A0A087WT03 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRAV26-1A0A087WT03 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV26-1A0A087WT03 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV26-1A0A087WT03 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV26-1A0A087WT03 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
TRAV26-1A0A087WT03 AC025884.2-201ENST00000553429 711 ntBASIC17.18■□□□□ 0.34
TRAV26-1A0A087WT03 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV26-1A0A087WT03 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV26-1A0A087WT03 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRAV26-1A0A087WT03 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV26-1A0A087WT03 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV26-1A0A087WT03 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV26-1A0A087WT03 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV26-1A0A087WT03 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRAV26-1A0A087WT03 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV26-1A0A087WT03 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV26-1A0A087WT03 MIR3960-201ENST00000583311 91 ntBASIC17.17■□□□□ 0.34
TRAV26-1A0A087WT03 AC007029.1-201ENST00000604183 313 ntBASIC17.17■□□□□ 0.34
TRAV26-1A0A087WT03 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV26-1A0A087WT03 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRAV26-1A0A087WT03 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV26-1A0A087WT03 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV26-1A0A087WT03 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.16■□□□□ 0.34
TRAV26-1A0A087WT03 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV26-1A0A087WT03 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV26-1A0A087WT03 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV26-1A0A087WT03 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
TRAV26-1A0A087WT03 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV26-1A0A087WT03 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms