Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 TCAF1P1-201ENST00000414990 2232 ntBASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 AC118758.2-201ENST00000614242 2813 ntBASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 OS9-204ENST00000389146 2091 ntTSL 2 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 CICP8-201ENST00000455800 2813 ntBASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 AL139385.1-201ENST00000611744 3272 ntBASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 DGCR9-201ENST00000609630 2415 ntBASIC8.88□□□□□ -0.99
LINC01558Q9Y6Z2 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 TFP1-202ENST00000475455 1573 ntBASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 AL162393.1-201ENST00000437852 946 ntBASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LINC01558Q9Y6Z2 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms