Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PCDHGB1Q9Y5G3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PCDHGB1Q9Y5G3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
PCDHGB1Q9Y5G3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.83■□□□□ 0.13
PCDHGB1Q9Y5G3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
PCDHGB1Q9Y5G3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.83■□□□□ 0.13
PCDHGB1Q9Y5G3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 PVRIG2P-201ENST00000435460 978 ntBASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 RBM17P1-201ENST00000453646 1190 ntBASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 C2orf69P3-201ENST00000565542 1120 ntBASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 AL512604.3-201ENST00000569583 964 ntBASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 AP000525.1-201ENST00000608286 694 ntBASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 LINC01568-207ENST00000641790 1380 ntBASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGB1Q9Y5G3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 MIR1238-201ENST00000408483 83 ntBASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 AC113347.1-201ENST00000413321 391 ntBASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 AC124947.2-201ENST00000547118 1133 ntBASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 MIR3917-201ENST00000580971 93 ntBASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 BX276092.7-203ENST00000637198 1536 ntBASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 AC093525.9-201ENST00000624961 1746 ntBASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB1Q9Y5G3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 AL137013.1-201ENST00000432946 1228 ntBASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB1Q9Y5G3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms