Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGC4Q9Y5F7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.39■□□□□ 0.38
PCDHGC4Q9Y5F7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHGC4Q9Y5F7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHGC4Q9Y5F7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 AL356488.2-201ENST00000602755 427 ntBASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC4Q9Y5F7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 PTCHD3P3-201ENST00000403073 906 ntBASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC4Q9Y5F7 GPR89P-201ENST00000407924 1495 ntBASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms