Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.54■■□□□ 1.04
RTCBQ9Y3I0 AC009118.2-201ENST00000613275 655 ntBASIC21.54■■□□□ 1.04
RTCBQ9Y3I0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RTCBQ9Y3I0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.54■■□□□ 1.04
RTCBQ9Y3I0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTCBQ9Y3I0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTCBQ9Y3I0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 AP000974.1-201ENST00000623909 2387 ntBASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 RNU1-129P-201ENST00000384064 167 ntBASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 AC027369.6-201ENST00000525520 931 ntBASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 U1.21-201ENST00000580816 167 ntBASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 AL031055.1-201ENST00000606362 631 ntBASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 AC073592.8-201ENST00000624126 511 ntBASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTCBQ9Y3I0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
RTCBQ9Y3I0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTCBQ9Y3I0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
RTCBQ9Y3I0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RTCBQ9Y3I0 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTCBQ9Y3I0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC21.52■■□□□ 1.04
RTCBQ9Y3I0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC21.52■■□□□ 1.04
RTCBQ9Y3I0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC21.52■■□□□ 1.04
RTCBQ9Y3I0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC21.52■■□□□ 1.04
RTCBQ9Y3I0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC21.52■■□□□ 1.04
RTCBQ9Y3I0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC21.52■■□□□ 1.04
RTCBQ9Y3I0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC21.52■■□□□ 1.04
RTCBQ9Y3I0 AL590560.3-201ENST00000623350 461 ntBASIC21.52■■□□□ 1.04
RTCBQ9Y3I0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RTCBQ9Y3I0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTCBQ9Y3I0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTCBQ9Y3I0 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.52■■□□□ 1.04
RTCBQ9Y3I0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTCBQ9Y3I0 AC100757.3-201ENST00000622361 1406 ntBASIC21.52■■□□□ 1.04
RTCBQ9Y3I0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTCBQ9Y3I0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC21.52■■□□□ 1.04
RTCBQ9Y3I0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.52■■□□□ 1.03
RTCBQ9Y3I0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.51■■□□□ 1.03
RTCBQ9Y3I0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 LYSMD4-203ENST00000378904 2122 ntBASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 RN7SL692P-201ENST00000464677 288 ntBASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 AL359881.2-201ENST00000602973 570 ntBASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RTCBQ9Y3I0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms