Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 AC002310.6-201ENST00000624451 1377 ntBASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 CROCCP2-202ENST00000412962 2773 ntBASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 AC023274.1-201ENST00000418278 595 ntBASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 AC004832.2-201ENST00000426397 482 ntBASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 CXCL1P1-201ENST00000502804 216 ntBASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 AC129492.6-201ENST00000611383 1305 ntBASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 RHOQP3-201ENST00000437982 621 ntBASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN1Q9UMX0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 FAM185BP-201ENST00000443595 716 ntBASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN1Q9UMX0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.4■□□□□ 0.54
UBQLN1Q9UMX0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.4■□□□□ 0.54
UBQLN1Q9UMX0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBQLN1Q9UMX0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBQLN1Q9UMX0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
UBQLN1Q9UMX0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.4■□□□□ 0.54
UBQLN1Q9UMX0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBQLN1Q9UMX0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBQLN1Q9UMX0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBQLN1Q9UMX0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBQLN1Q9UMX0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.4■□□□□ 0.54
UBQLN1Q9UMX0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
UBQLN1Q9UMX0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.4■□□□□ 0.54
UBQLN1Q9UMX0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBQLN1Q9UMX0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBQLN1Q9UMX0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms