Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 AC006449.5-201ENST00000610658 2098 ntBASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 ABHD17AP1-201ENST00000358206 933 ntBASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 KRT18P29-201ENST00000397031 1267 ntBASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 DDX43P3-201ENST00000441064 443 ntBASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
SND1-IT1Q9HBX3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 RPS2P55-201ENST00000397318 883 ntBASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 AC107956.1-201ENST00000494359 873 ntBASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 CD99P1-205ENST00000527459 561 ntBASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC11.59□□□□□ -0.55
SND1-IT1Q9HBX3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms