Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTFDC1Q9BY42 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTFDC1Q9BY42 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTFDC1Q9BY42 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTFDC1Q9BY42 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTFDC1Q9BY42 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RTFDC1Q9BY42 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.78■□□□□ 0.92
RTFDC1Q9BY42 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTFDC1Q9BY42 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.78■□□□□ 0.92
RTFDC1Q9BY42 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC20.78■□□□□ 0.92
RTFDC1Q9BY42 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.78■□□□□ 0.92
RTFDC1Q9BY42 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.78■□□□□ 0.92
RTFDC1Q9BY42 GAPDHP21-201ENST00000450301 1010 ntBASIC20.78■□□□□ 0.92
RTFDC1Q9BY42 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC20.78■□□□□ 0.92
RTFDC1Q9BY42 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.78■□□□□ 0.92
RTFDC1Q9BY42 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.78■□□□□ 0.92
RTFDC1Q9BY42 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RTFDC1Q9BY42 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTFDC1Q9BY42 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTFDC1Q9BY42 UXT-AS1-201ENST00000590504 1525 ntBASIC20.78■□□□□ 0.92
RTFDC1Q9BY42 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 MIR346-201ENST00000362234 95 ntBASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 AC097493.3-201ENST00000509725 367 ntBASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTFDC1Q9BY42 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RTFDC1Q9BY42 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTFDC1Q9BY42 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTFDC1Q9BY42 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.76■□□□□ 0.91
RTFDC1Q9BY42 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RTFDC1Q9BY42 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTFDC1Q9BY42 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RTFDC1Q9BY42 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.76■□□□□ 0.91
RTFDC1Q9BY42 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC20.76■□□□□ 0.91
RTFDC1Q9BY42 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC20.76■□□□□ 0.91
RTFDC1Q9BY42 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
RTFDC1Q9BY42 AL390754.1-201ENST00000619088 582 ntBASIC20.76■□□□□ 0.91
RTFDC1Q9BY42 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTFDC1Q9BY42 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
RTFDC1Q9BY42 WASH6P-202ENST00000359512 1437 ntBASIC20.76■□□□□ 0.91
RTFDC1Q9BY42 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTFDC1Q9BY42 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
RTFDC1Q9BY42 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTFDC1Q9BY42 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 PPP6R2P1-201ENST00000450880 1275 ntBASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 ALG1L8P-201ENST00000533887 760 ntBASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 AC008267.7-201ENST00000624570 1194 ntBASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 AC012317.2-201ENST00000623305 2251 ntBASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 AL353732.1-201ENST00000569618 1459 ntBASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RTFDC1Q9BY42 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 AC092580.3-201ENST00000430932 139 ntBASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms