Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AL136038.3-201ENST00000561909 1096 ntBASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 NTF6B-201ENST00000591913 560 ntBASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 AC018695.7-201ENST00000624587 2492 ntBASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.76□□□□□ -0.21
CHRDL1Q9BU40 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 AC011498.5-201ENST00000592027 486 ntBASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 HLA-J-201ENST00000462773 1622 ntBASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHRDL1Q9BU40 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 GUSBP12-201ENST00000513727 720 ntBASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRDL1Q9BU40 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms