Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 AC004263.2-201ENST00000617183 678 ntBASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 AC113410.3-201ENST00000623366 203 ntBASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.14■□□□□ 0.34
CKAP2Q8WWK9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 AL645728.1-201ENST00000366221 2101 ntBASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 TSPY12P-201ENST00000421279 868 ntBASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 FRMD8P1-201ENST00000440433 1524 ntBASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CKAP2Q8WWK9 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 COX5BP2-201ENST00000392354 334 ntBASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CKAP2Q8WWK9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CKAP2Q8WWK9 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms