Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.47■□□□□ 0.39
SYNPOQ8N3V7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.47■□□□□ 0.39
SYNPOQ8N3V7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
SYNPOQ8N3V7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SYNPOQ8N3V7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SYNPOQ8N3V7 AC239800.4-201ENST00000603712 296 ntBASIC17.47■□□□□ 0.39
SYNPOQ8N3V7 AC026120.1-201ENST00000611536 926 ntBASIC17.47■□□□□ 0.39
SYNPOQ8N3V7 AL645728.2-201ENST00000641974 660 ntBASIC17.47■□□□□ 0.39
SYNPOQ8N3V7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SYNPOQ8N3V7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SYNPOQ8N3V7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SYNPOQ8N3V7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SYNPOQ8N3V7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SYNPOQ8N3V7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SYNPOQ8N3V7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SYNPOQ8N3V7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SYNPOQ8N3V7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SYNPOQ8N3V7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SYNPOQ8N3V7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 AL627223.1-201ENST00000416693 442 ntBASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 AP000997.3-201ENST00000623333 2250 ntBASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 HCG11-201ENST00000411553 5696 ntBASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SYNPOQ8N3V7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 AC092919.2-201ENST00000623631 1645 ntBASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.44■□□□□ 0.38
SYNPOQ8N3V7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms