Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SCUBE3Q8IX30 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 RNA5SP419-201ENST00000515908 135 ntBASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 AL049840.3-201ENST00000602669 611 ntBASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 AL139424.1-201ENST00000607572 797 ntBASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 AC117500.6-201ENST00000624871 588 ntBASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 FAM215A-202ENST00000632077 792 ntBASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 HLA-A-201ENST00000376802 1334 ntBASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 AL590787.1-201ENST00000568856 1315 ntBASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 AC006504.4-201ENST00000592118 1568 ntBASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.12■□□□□ 0.49
SCUBE3Q8IX30 AC092053.1-201ENST00000605787 1936 ntBASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 AC080080.1-201ENST00000625121 2420 ntBASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 RPS2P28-201ENST00000314255 741 ntBASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 AC120057.1-201ENST00000483947 663 ntBASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 AL662844.1-201ENST00000546340 181 ntBASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 AC008735.5-201ENST00000623544 497 ntBASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 LINC02012-201ENST00000608206 1725 ntBASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SCUBE3Q8IX30 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 EGFEM1P-202ENST00000431685 1563 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms