Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 MYCLP1-201ENST00000372451 1075 ntBASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 TSPY12P-201ENST00000421279 868 ntBASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 KRT18P21-201ENST00000515767 1272 ntBASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 ECEL1P2-202ENST00000465689 757 ntBASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM42Q8IWZ5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 FAM210CP-201ENST00000445714 574 ntBASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM42Q8IWZ5 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM42Q8IWZ5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM42Q8IWZ5 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM42Q8IWZ5 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM42Q8IWZ5 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM42Q8IWZ5 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM42Q8IWZ5 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM42Q8IWZ5 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms