Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 HOXB1-202ENST00000577092 1414 ntBASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.17■□□□□ 0.02
LYSMD2Q8IV50 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 MESTP1-201ENST00000404287 994 ntBASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 DDX43P3-201ENST00000441064 443 ntBASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 RN7SL471P-201ENST00000580476 299 ntBASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 AC138035.3-201ENST00000622706 2791 ntBASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 HLA-A-202ENST00000376806 1854 ntBASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.16■□□□□ 0.02
LYSMD2Q8IV50 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms