Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 NTF6B-201ENST00000591913 560 ntBASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 AP003733.1-201ENST00000491725 852 ntBASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 AC113404.2-201ENST00000507884 177 ntBASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 PHGDH-209ENST00000641074 1780 ntBASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM53Q6P2H8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 MIR662-201ENST00000384847 95 ntBASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 AC087388.1-201ENST00000571370 1112 ntBASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 HYMAI.1-201ENST00000620949 238 ntBASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms