Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.25■□□□□ 0.03
NKX6-1P78426 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.25■□□□□ 0.03
NKX6-1P78426 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.25■□□□□ 0.03
NKX6-1P78426 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.25■□□□□ 0.03
NKX6-1P78426 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.25■□□□□ 0.03
NKX6-1P78426 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NKX6-1P78426 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX6-1P78426 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX6-1P78426 AC009949.1-201ENST00000623048 1830 ntBASIC15.24■□□□□ 0.03
NKX6-1P78426 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NKX6-1P78426 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX6-1P78426 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX6-1P78426 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.24■□□□□ 0.03
NKX6-1P78426 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX6-1P78426 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
NKX6-1P78426 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.24■□□□□ 0.03
NKX6-1P78426 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX6-1P78426 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.24■□□□□ 0.03
NKX6-1P78426 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX6-1P78426 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.24■□□□□ 0.03
NKX6-1P78426 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.24■□□□□ 0.03
NKX6-1P78426 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX6-1P78426 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
NKX6-1P78426 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
NKX6-1P78426 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX6-1P78426 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.24■□□□□ 0.03
NKX6-1P78426 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.24■□□□□ 0.03
NKX6-1P78426 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.24■□□□□ 0.03
NKX6-1P78426 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
NKX6-1P78426 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.24■□□□□ 0.03
NKX6-1P78426 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.24■□□□□ 0.03
NKX6-1P78426 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.24■□□□□ 0.03
NKX6-1P78426 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NKX6-1P78426 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX6-1P78426 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
NKX6-1P78426 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX6-1P78426 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
NKX6-1P78426 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NKX6-1P78426 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.24■□□□□ 0.03
NKX6-1P78426 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX6-1P78426 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX6-1P78426 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.23■□□□□ 0.03
NKX6-1P78426 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
NKX6-1P78426 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 AC141586.5-201ENST00000624546 2050 ntBASIC15.23■□□□□ 0.03
NKX6-1P78426 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NKX6-1P78426 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NKX6-1P78426 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.23■□□□□ 0.03
NKX6-1P78426 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
NKX6-1P78426 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.23■□□□□ 0.03
NKX6-1P78426 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.23■□□□□ 0.03
NKX6-1P78426 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
NKX6-1P78426 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.23■□□□□ 0.03
NKX6-1P78426 AC134684.3-201ENST00000641758 218 ntBASIC15.23■□□□□ 0.03
NKX6-1P78426 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
NKX6-1P78426 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.23■□□□□ 0.03
NKX6-1P78426 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NKX6-1P78426 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.23■□□□□ 0.03
NKX6-1P78426 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-1P78426 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-1P78426 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.22■□□□□ 0.03
NKX6-1P78426 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-1P78426 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-1P78426 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-1P78426 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-1P78426 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-1P78426 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NKX6-1P78426 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-1P78426 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
NKX6-1P78426 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-1P78426 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms