Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
HIST1H3AP68431 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
HIST1H3AP68431 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
HIST1H3AP68431 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.07■□□□□ 0
HIST1H3AP68431 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.07■□□□□ 0
HIST1H3AP68431 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.07■□□□□ 0
HIST1H3AP68431 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.07■□□□□ 0
HIST1H3AP68431 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.07■□□□□ 0
HIST1H3AP68431 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.07■□□□□ 0
HIST1H3AP68431 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
HIST1H3AP68431 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.07■□□□□ 0
HIST1H3AP68431 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
HIST1H3AP68431 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.07■□□□□ 0
HIST1H3AP68431 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.07■□□□□ 0
HIST1H3AP68431 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.07■□□□□ 0
HIST1H3AP68431 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
HIST1H3AP68431 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.06■□□□□ 0
HIST1H3AP68431 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
HIST1H3AP68431 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.06■□□□□ 0
HIST1H3AP68431 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
HIST1H3AP68431 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST1H3AP68431 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
HIST1H3AP68431 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
HIST1H3AP68431 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST1H3AP68431 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HIST1H3AP68431 FER1L4-210ENST00000615531 5998 ntBASIC15.06■□□□□ 0
HIST1H3AP68431 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST1H3AP68431 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
HIST1H3AP68431 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST1H3AP68431 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.06■□□□□ 0
HIST1H3AP68431 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.06■□□□□ 0
HIST1H3AP68431 TSPY19P-201ENST00000418461 509 ntBASIC15.06■□□□□ 0
HIST1H3AP68431 TSPY18P-201ENST00000441642 509 ntBASIC15.06■□□□□ 0
HIST1H3AP68431 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.06■□□□□ 0
HIST1H3AP68431 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.06■□□□□ 0
HIST1H3AP68431 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.06■□□□□ 0
HIST1H3AP68431 KRT18P31-201ENST00000506277 1292 ntBASIC15.06■□□□□ 0
HIST1H3AP68431 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.06■□□□□ 0
HIST1H3AP68431 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.06■□□□□ 0
HIST1H3AP68431 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HIST1H3AP68431 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.06■□□□□ 0
HIST1H3AP68431 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.06■□□□□ 0
HIST1H3AP68431 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.06■□□□□ 0
HIST1H3AP68431 AL121772.3-201ENST00000610840 674 ntBASIC15.06■□□□□ 0
HIST1H3AP68431 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HIST1H3AP68431 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.06■□□□□ 0
HIST1H3AP68431 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST1H3AP68431 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST1H3AP68431 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HIST1H3AP68431 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
HIST1H3AP68431 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST1H3AP68431 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.06■□□□□ 0
HIST1H3AP68431 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.06■□□□□ 0
HIST1H3AP68431 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.06■□□□□ 0
HIST1H3AP68431 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST1H3AP68431 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
HIST1H3AP68431 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HIST1H3AP68431 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST1H3AP68431 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.06■□□□□ 0
HIST1H3AP68431 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST1H3AP68431 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.05■□□□□ 0
HIST1H3AP68431 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.05■□□□□ 0
HIST1H3AP68431 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
HIST1H3AP68431 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.05■□□□□ 0
HIST1H3AP68431 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.05■□□□□ 0
HIST1H3AP68431 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.05■□□□□ 0
HIST1H3AP68431 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HIST1H3AP68431 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIST1H3AP68431 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.05■□□□□ -0
HIST1H3AP68431 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.05■□□□□ -0
HIST1H3AP68431 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.05■□□□□ -0
HIST1H3AP68431 LINC00982-205ENST00000420957 435 ntBASIC15.05■□□□□ -0
HIST1H3AP68431 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
HIST1H3AP68431 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.05■□□□□ -0
HIST1H3AP68431 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.05■□□□□ -0
HIST1H3AP68431 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.05■□□□□ -0
HIST1H3AP68431 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.05■□□□□ -0
HIST1H3AP68431 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms