Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.1□□□□□ -0.15
SPCS3P61009 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS3P61009 AL136038.4-201ENST00000603606 1261 ntBASIC14.1□□□□□ -0.15
SPCS3P61009 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.1□□□□□ -0.15
SPCS3P61009 AC141257.4-201ENST00000634557 245 ntBASIC14.1□□□□□ -0.15
SPCS3P61009 AC136944.6-201ENST00000634818 245 ntBASIC14.1□□□□□ -0.15
SPCS3P61009 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SPCS3P61009 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS3P61009 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SPCS3P61009 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SPCS3P61009 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS3P61009 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS3P61009 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SPCS3P61009 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.1□□□□□ -0.15
SPCS3P61009 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPCS3P61009 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SPCS3P61009 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.09□□□□□ -0.15
SPCS3P61009 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.09□□□□□ -0.15
SPCS3P61009 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SPCS3P61009 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.09□□□□□ -0.15
SPCS3P61009 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SPCS3P61009 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SPCS3P61009 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SPCS3P61009 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.09□□□□□ -0.15
SPCS3P61009 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.09□□□□□ -0.15
SPCS3P61009 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.09□□□□□ -0.15
SPCS3P61009 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.09□□□□□ -0.15
SPCS3P61009 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.09□□□□□ -0.15
SPCS3P61009 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SPCS3P61009 RASA4DP-201ENST00000460726 1199 ntBASIC14.09□□□□□ -0.15
SPCS3P61009 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.09□□□□□ -0.15
SPCS3P61009 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.09□□□□□ -0.15
SPCS3P61009 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.09□□□□□ -0.15
SPCS3P61009 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.09□□□□□ -0.15
SPCS3P61009 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.09□□□□□ -0.15
SPCS3P61009 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
SPCS3P61009 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 AGGF1P2-201ENST00000426656 2106 ntBASIC14.09□□□□□ -0.15
SPCS3P61009 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.09□□□□□ -0.15
SPCS3P61009 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.09□□□□□ -0.15
SPCS3P61009 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPCS3P61009 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SPCS3P61009 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SPCS3P61009 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
SPCS3P61009 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SPCS3P61009 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SPCS3P61009 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
SPCS3P61009 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SPCS3P61009 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.08□□□□□ -0.15
SPCS3P61009 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SPCS3P61009 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 UBALD1-205ENST00000590891 2641 ntBASIC14.08□□□□□ -0.16
SPCS3P61009 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.08□□□□□ -0.16
SPCS3P61009 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.08□□□□□ -0.16
SPCS3P61009 LINC02012-201ENST00000608206 1725 ntBASIC14.08□□□□□ -0.16
SPCS3P61009 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.08□□□□□ -0.16
SPCS3P61009 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.08□□□□□ -0.16
SPCS3P61009 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.08□□□□□ -0.16
SPCS3P61009 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS3P61009 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.08□□□□□ -0.16
SPCS3P61009 AC002558.1-201ENST00000488906 803 ntBASIC14.08□□□□□ -0.16
SPCS3P61009 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.08□□□□□ -0.16
SPCS3P61009 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.08□□□□□ -0.16
SPCS3P61009 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.08□□□□□ -0.16
SPCS3P61009 AC140113.3-201ENST00000605663 199 ntBASIC14.08□□□□□ -0.16
SPCS3P61009 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms