Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH15P55291 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.15■□□□□ 0.18
CDH15P55291 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.15■□□□□ 0.18
CDH15P55291 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.18
CDH15P55291 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CDH15P55291 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
CDH15P55291 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDH15P55291 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDH15P55291 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH15P55291 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CDH15P55291 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDH15P55291 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH15P55291 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH15P55291 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH15P55291 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH15P55291 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH15P55291 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH15P55291 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH15P55291 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH15P55291 ATP5G1P1-201ENST00000448724 379 ntBASIC16.14■□□□□ 0.17
CDH15P55291 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH15P55291 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
CDH15P55291 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH15P55291 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH15P55291 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH15P55291 SLC25A1P4-201ENST00000567977 778 ntBASIC16.14■□□□□ 0.17
CDH15P55291 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH15P55291 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.14■□□□□ 0.17
CDH15P55291 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH15P55291 AP000692.2-201ENST00000608391 879 ntBASIC16.14■□□□□ 0.17
CDH15P55291 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDH15P55291 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH15P55291 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH15P55291 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH15P55291 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH15P55291 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH15P55291 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH15P55291 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH15P55291 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH15P55291 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDH15P55291 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH15P55291 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDH15P55291 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH15P55291 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDH15P55291 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
CDH15P55291 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH15P55291 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
CDH15P55291 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH15P55291 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH15P55291 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CDH15P55291 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH15P55291 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH15P55291 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH15P55291 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH15P55291 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH15P55291 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH15P55291 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH15P55291 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH15P55291 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH15P55291 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDH15P55291 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH15P55291 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH15P55291 DUX4L26-201ENST00000489078 1255 ntBASIC16.13■□□□□ 0.17
CDH15P55291 AC010203.1-204ENST00000548782 407 ntBASIC16.13■□□□□ 0.17
CDH15P55291 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH15P55291 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH15P55291 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH15P55291 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH15P55291 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CDH15P55291 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH15P55291 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH15P55291 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH15P55291 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH15P55291 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH15P55291 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH15P55291 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CDH15P55291 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH15P55291 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH15P55291 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH15P55291 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH15P55291 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH15P55291 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDH15P55291 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH15P55291 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH15P55291 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH15P55291 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH15P55291 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDH15P55291 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH15P55291 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH15P55291 ECEL1P2-202ENST00000465689 757 ntBASIC16.12■□□□□ 0.17
CDH15P55291 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH15P55291 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH15P55291 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDH15P55291 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH15P55291 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH15P55291 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH15P55291 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH15P55291 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDH15P55291 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH15P55291 AC036111.1-201ENST00000533973 1582 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms