Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AL353732.1-201ENST00000569618 1459 ntBASIC18.85■□□□□ 0.61
ACLYP53396 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.85■□□□□ 0.61
ACLYP53396 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ACLYP53396 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.85■□□□□ 0.61
ACLYP53396 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACLYP53396 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACLYP53396 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ACLYP53396 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACLYP53396 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ACLYP53396 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.85■□□□□ 0.61
ACLYP53396 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.85■□□□□ 0.61
ACLYP53396 AP000842.3-202ENST00000569238 1080 ntBASIC18.85■□□□□ 0.61
ACLYP53396 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
ACLYP53396 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACLYP53396 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.85■□□□□ 0.61
ACLYP53396 AC093503.3-201ENST00000624917 2352 ntBASIC18.85■□□□□ 0.61
ACLYP53396 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACLYP53396 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACLYP53396 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ACLYP53396 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ACLYP53396 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACLYP53396 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACLYP53396 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ACLYP53396 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ACLYP53396 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ACLYP53396 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.84■□□□□ 0.61
ACLYP53396 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ACLYP53396 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
ACLYP53396 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ACLYP53396 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ACLYP53396 AC138932.1-201ENST00000534164 6830 ntBASIC18.84■□□□□ 0.61
ACLYP53396 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ACLYP53396 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ACLYP53396 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ACLYP53396 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ACLYP53396 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ACLYP53396 MIR346-201ENST00000362234 95 ntBASIC18.84■□□□□ 0.61
ACLYP53396 CRB3P1-201ENST00000449338 276 ntBASIC18.84■□□□□ 0.61
ACLYP53396 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.84■□□□□ 0.61
ACLYP53396 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.84■□□□□ 0.61
ACLYP53396 AC027307.2-201ENST00000591252 911 ntBASIC18.84■□□□□ 0.61
ACLYP53396 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
ACLYP53396 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.84■□□□□ 0.61
ACLYP53396 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ACLYP53396 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ACLYP53396 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ACLYP53396 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ACLYP53396 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.84■□□□□ 0.61
ACLYP53396 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ACLYP53396 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ACLYP53396 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ACLYP53396 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
ACLYP53396 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ACLYP53396 LYSMD4-203ENST00000378904 2122 ntBASIC18.83■□□□□ 0.61
ACLYP53396 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.83■□□□□ 0.61
ACLYP53396 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.83■□□□□ 0.61
ACLYP53396 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ACLYP53396 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
ACLYP53396 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.83■□□□□ 0.61
ACLYP53396 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ACLYP53396 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ACLYP53396 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
ACLYP53396 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.83■□□□□ 0.6
ACLYP53396 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ACLYP53396 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
ACLYP53396 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
ACLYP53396 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.83■□□□□ 0.6
ACLYP53396 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.83■□□□□ 0.6
ACLYP53396 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ACLYP53396 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ACLYP53396 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.83■□□□□ 0.6
ACLYP53396 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ACLYP53396 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.83■□□□□ 0.6
ACLYP53396 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
ACLYP53396 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.83■□□□□ 0.6
ACLYP53396 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ACLYP53396 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ACLYP53396 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
ACLYP53396 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ACLYP53396 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ACLYP53396 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ACLYP53396 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ACLYP53396 AC090164.3-201ENST00000610780 2143 ntBASIC18.82■□□□□ 0.6
ACLYP53396 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ACLYP53396 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ACLYP53396 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.82■□□□□ 0.6
ACLYP53396 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.82■□□□□ 0.6
ACLYP53396 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.82■□□□□ 0.6
ACLYP53396 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
ACLYP53396 HCG4-201ENST00000418983 998 ntBASIC18.82■□□□□ 0.6
ACLYP53396 AC241585.1-201ENST00000433527 519 ntBASIC18.82■□□□□ 0.6
ACLYP53396 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ACLYP53396 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.82■□□□□ 0.6
ACLYP53396 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.82■□□□□ 0.6
ACLYP53396 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.82■□□□□ 0.6
ACLYP53396 MIR4453-201ENST00000584019 89 ntBASIC18.82■□□□□ 0.6
ACLYP53396 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.82■□□□□ 0.6
ACLYP53396 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.82■□□□□ 0.6
ACLYP53396 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ACLYP53396 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms