Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS2P33552 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS2P33552 MST1L-201ENST00000442552 2185 ntBASIC12.74□□□□□ -0.37
CKS2P33552 AC078925.2-201ENST00000624013 1973 ntBASIC12.74□□□□□ -0.37
CKS2P33552 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS2P33552 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CKS2P33552 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CKS2P33552 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CKS2P33552 PAUPAR-201ENST00000630360 2965 ntBASIC12.74□□□□□ -0.37
CKS2P33552 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS2P33552 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS2P33552 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CKS2P33552 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CKS2P33552 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CKS2P33552 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS2P33552 SERF2-207ENST00000409614 582 ntTSL 2 BASIC12.74□□□□□ -0.37
CKS2P33552 AC133681.1-201ENST00000465482 601 ntBASIC12.74□□□□□ -0.37
CKS2P33552 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.74□□□□□ -0.37
CKS2P33552 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC12.74□□□□□ -0.37
CKS2P33552 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC12.74□□□□□ -0.37
CKS2P33552 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC12.74□□□□□ -0.37
CKS2P33552 AC233263.1-201ENST00000578059 224 ntBASIC12.74□□□□□ -0.37
CKS2P33552 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12.74□□□□□ -0.37
CKS2P33552 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.74□□□□□ -0.37
CKS2P33552 AC112497.1-201ENST00000624824 639 ntBASIC12.74□□□□□ -0.37
CKS2P33552 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS2P33552 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS2P33552 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
CKS2P33552 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CKS2P33552 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS2P33552 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS2P33552 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS2P33552 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CKS2P33552 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS2P33552 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.74□□□□□ -0.37
CKS2P33552 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CKS2P33552 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.74□□□□□ -0.37
CKS2P33552 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CKS2P33552 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS2P33552 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.74□□□□□ -0.37
CKS2P33552 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS2P33552 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS2P33552 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS2P33552 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CKS2P33552 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CKS2P33552 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.73□□□□□ -0.37
CKS2P33552 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
CKS2P33552 BANP-201ENST00000286122 2368 ntTSL 5 BASIC12.73□□□□□ -0.37
CKS2P33552 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS2P33552 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS2P33552 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS2P33552 OR2I1P-209ENST00000641730 5365 ntBASIC12.73□□□□□ -0.37
CKS2P33552 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CKS2P33552 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC12.73□□□□□ -0.37
CKS2P33552 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS2P33552 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS2P33552 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.73□□□□□ -0.37
CKS2P33552 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS2P33552 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CKS2P33552 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS2P33552 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CKS2P33552 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.73□□□□□ -0.37
CKS2P33552 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CKS2P33552 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC12.73□□□□□ -0.37
CKS2P33552 AL356309.3-201ENST00000624132 1934 ntBASIC12.73□□□□□ -0.37
CKS2P33552 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS2P33552 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC12.73□□□□□ -0.37
CKS2P33552 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
CKS2P33552 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC12.73□□□□□ -0.37
CKS2P33552 AL355355.2-201ENST00000442321 338 ntBASIC12.73□□□□□ -0.37
CKS2P33552 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CKS2P33552 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CKS2P33552 DLX3-202ENST00000512495 834 ntTSL 2 BASIC12.73□□□□□ -0.37
CKS2P33552 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12.73□□□□□ -0.37
CKS2P33552 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC12.73□□□□□ -0.37
CKS2P33552 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC12.73□□□□□ -0.37
CKS2P33552 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC12.73□□□□□ -0.37
CKS2P33552 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC12.73□□□□□ -0.37
CKS2P33552 CYGB-204ENST00000589342 815 ntTSL 3 BASIC12.73□□□□□ -0.37
CKS2P33552 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.73□□□□□ -0.37
CKS2P33552 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS2P33552 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CKS2P33552 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.73□□□□□ -0.37
CKS2P33552 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS2P33552 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS2P33552 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.73□□□□□ -0.37
CKS2P33552 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS2P33552 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.73□□□□□ -0.37
CKS2P33552 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS2P33552 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC12.73□□□□□ -0.37
CKS2P33552 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC12.72□□□□□ -0.37
CKS2P33552 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC12.72□□□□□ -0.37
CKS2P33552 LINC00167-201ENST00000530583 1419 ntBASIC12.72□□□□□ -0.37
CKS2P33552 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.72□□□□□ -0.37
CKS2P33552 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CKS2P33552 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC12.72□□□□□ -0.37
CKS2P33552 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CKS2P33552 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms