Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.84■□□□□ 0.13
SHC1P29353 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.84■□□□□ 0.13
SHC1P29353 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SHC1P29353 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SHC1P29353 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SHC1P29353 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.84■□□□□ 0.13
SHC1P29353 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHC1P29353 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHC1P29353 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
SHC1P29353 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SHC1P29353 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.84■□□□□ 0.13
SHC1P29353 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SHC1P29353 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHC1P29353 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHC1P29353 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHC1P29353 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SHC1P29353 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
SHC1P29353 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SHC1P29353 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SHC1P29353 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.83■□□□□ 0.12
SHC1P29353 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SHC1P29353 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHC1P29353 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHC1P29353 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.83■□□□□ 0.12
SHC1P29353 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHC1P29353 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SHC1P29353 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.83■□□□□ 0.12
SHC1P29353 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.83■□□□□ 0.12
SHC1P29353 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.83■□□□□ 0.12
SHC1P29353 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.83■□□□□ 0.12
SHC1P29353 AC111152.3-201ENST00000569699 673 ntBASIC15.83■□□□□ 0.12
SHC1P29353 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHC1P29353 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.83■□□□□ 0.12
SHC1P29353 AD001527.2-201ENST00000622994 785 ntBASIC15.83■□□□□ 0.12
SHC1P29353 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.83■□□□□ 0.12
SHC1P29353 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHC1P29353 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHC1P29353 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHC1P29353 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.83■□□□□ 0.12
SHC1P29353 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHC1P29353 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHC1P29353 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.83■□□□□ 0.12
SHC1P29353 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHC1P29353 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHC1P29353 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.83■□□□□ 0.12
SHC1P29353 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SHC1P29353 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.82■□□□□ 0.12
SHC1P29353 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.82■□□□□ 0.12
SHC1P29353 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.82■□□□□ 0.12
SHC1P29353 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
SHC1P29353 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SHC1P29353 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SHC1P29353 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SHC1P29353 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
SHC1P29353 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.82■□□□□ 0.12
SHC1P29353 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.82■□□□□ 0.12
SHC1P29353 AC103564.2-201ENST00000432853 1299 ntBASIC15.82■□□□□ 0.12
SHC1P29353 ABCD1P5-201ENST00000445663 754 ntBASIC15.82■□□□□ 0.12
SHC1P29353 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.82■□□□□ 0.12
SHC1P29353 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.82■□□□□ 0.12
SHC1P29353 REXO1L6P-202ENST00000619970 1078 ntBASIC15.82■□□□□ 0.12
SHC1P29353 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SHC1P29353 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 HLA-J-201ENST00000462773 1622 ntBASIC15.82■□□□□ 0.12
SHC1P29353 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHC1P29353 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.82■□□□□ 0.12
SHC1P29353 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.81■□□□□ 0.12
SHC1P29353 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHC1P29353 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHC1P29353 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHC1P29353 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms