Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DMAP28067 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DMAP28067 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DMAP28067 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DMAP28067 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DMAP28067 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DMAP28067 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DMAP28067 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.97□□□□□ -0.01
HLA-DMAP28067 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DMAP28067 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
HLA-DMAP28067 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DMAP28067 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DMAP28067 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DMAP28067 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HLA-DMAP28067 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DMAP28067 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.97□□□□□ -0.01
HLA-DMAP28067 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DMAP28067 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DMAP28067 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.97□□□□□ -0.01
HLA-DMAP28067 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.97□□□□□ -0.01
HLA-DMAP28067 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DMAP28067 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.97□□□□□ -0.01
HLA-DMAP28067 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DMAP28067 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DMAP28067 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
HLA-DMAP28067 CD177P1-201ENST00000606252 935 ntBASIC14.97□□□□□ -0.01
HLA-DMAP28067 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DMAP28067 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DMAP28067 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.97□□□□□ -0.01
HLA-DMAP28067 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DMAP28067 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DMAP28067 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DMAP28067 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DMAP28067 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DMAP28067 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
HLA-DMAP28067 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DMAP28067 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.97□□□□□ -0.01
HLA-DMAP28067 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DMAP28067 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DMAP28067 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DMAP28067 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
HLA-DMAP28067 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DMAP28067 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DMAP28067 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DMAP28067 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DMAP28067 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
HLA-DMAP28067 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HLA-DMAP28067 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
HLA-DMAP28067 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HLA-DMAP28067 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DMAP28067 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.96□□□□□ -0.01
HLA-DMAP28067 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DMAP28067 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DMAP28067 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DMAP28067 AP003041.3-201ENST00000527151 707 ntBASIC14.96□□□□□ -0.01
HLA-DMAP28067 LINC00167-201ENST00000530583 1419 ntBASIC14.96□□□□□ -0.01
HLA-DMAP28067 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.96□□□□□ -0.01
HLA-DMAP28067 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DMAP28067 WWOX-216ENST00000569818 525 ntBASIC14.96□□□□□ -0.01
HLA-DMAP28067 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
HLA-DMAP28067 AC010240.3-201ENST00000607688 395 ntBASIC14.96□□□□□ -0.01
HLA-DMAP28067 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.96□□□□□ -0.01
HLA-DMAP28067 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DMAP28067 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DMAP28067 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
HLA-DMAP28067 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DMAP28067 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DMAP28067 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DMAP28067 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.96□□□□□ -0.02
HLA-DMAP28067 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
HLA-DMAP28067 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.96□□□□□ -0.02
HLA-DMAP28067 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DMAP28067 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DMAP28067 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.96□□□□□ -0.02
HLA-DMAP28067 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.96□□□□□ -0.02
HLA-DMAP28067 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms