Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.75■□□□□ 0.91
ATP2B4P23634 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.75■□□□□ 0.91
ATP2B4P23634 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B4P23634 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B4P23634 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B4P23634 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B4P23634 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B4P23634 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP2B4P23634 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP2B4P23634 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B4P23634 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B4P23634 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ATP2B4P23634 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP2B4P23634 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
ATP2B4P23634 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B4P23634 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
ATP2B4P23634 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B4P23634 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B4P23634 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B4P23634 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B4P23634 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.74■□□□□ 0.91
ATP2B4P23634 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B4P23634 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP2B4P23634 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B4P23634 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP2B4P23634 RBPMS2P1-201ENST00000437762 623 ntBASIC20.74■□□□□ 0.91
ATP2B4P23634 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B4P23634 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B4P23634 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
ATP2B4P23634 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
ATP2B4P23634 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.74■□□□□ 0.91
ATP2B4P23634 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B4P23634 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B4P23634 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B4P23634 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ATP2B4P23634 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B4P23634 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B4P23634 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP2B4P23634 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP2B4P23634 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B4P23634 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B4P23634 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.73■□□□□ 0.91
ATP2B4P23634 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B4P23634 EGFEM1P-202ENST00000431685 1563 ntBASIC20.73■□□□□ 0.91
ATP2B4P23634 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B4P23634 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP2B4P23634 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B4P23634 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.73■□□□□ 0.91
ATP2B4P23634 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B4P23634 RNA5SP421-201ENST00000516864 134 ntBASIC20.73■□□□□ 0.91
ATP2B4P23634 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B4P23634 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.73■□□□□ 0.91
ATP2B4P23634 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B4P23634 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ATP2B4P23634 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP2B4P23634 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP2B4P23634 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP2B4P23634 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B4P23634 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B4P23634 AC135050.7-201ENST00000624508 2218 ntBASIC20.73■□□□□ 0.91
ATP2B4P23634 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B4P23634 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP2B4P23634 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B4P23634 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B4P23634 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ATP2B4P23634 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP2B4P23634 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
ATP2B4P23634 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B4P23634 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP2B4P23634 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ATP2B4P23634 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B4P23634 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B4P23634 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP2B4P23634 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B4P23634 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B4P23634 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B4P23634 COX20P2-201ENST00000452636 358 ntBASIC20.72■□□□□ 0.91
ATP2B4P23634 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.72■□□□□ 0.91
ATP2B4P23634 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.72■□□□□ 0.91
ATP2B4P23634 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.72■□□□□ 0.91
ATP2B4P23634 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.72■□□□□ 0.91
ATP2B4P23634 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.72■□□□□ 0.91
ATP2B4P23634 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ATP2B4P23634 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B4P23634 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20.72■□□□□ 0.91
ATP2B4P23634 AC084121.4-201ENST00000641598 221 ntBASIC20.72■□□□□ 0.91
ATP2B4P23634 AF228730.8-201ENST00000642140 221 ntBASIC20.72■□□□□ 0.91
ATP2B4P23634 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B4P23634 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.72■□□□□ 0.91
ATP2B4P23634 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B4P23634 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.72■□□□□ 0.91
ATP2B4P23634 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ATP2B4P23634 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP2B4P23634 TUBB3P1-201ENST00000405796 1332 ntBASIC20.72■□□□□ 0.91
ATP2B4P23634 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP2B4P23634 TOP3BP1-201ENST00000420768 1380 ntBASIC20.72■□□□□ 0.91
ATP2B4P23634 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2B4P23634 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2B4P23634 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ATP2B4P23634 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms