Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN1P18031 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN1P18031 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN1P18031 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN1P18031 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN1P18031 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN1P18031 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN1P18031 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN1P18031 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN1P18031 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN1P18031 PAWRP1-201ENST00000451083 565 ntBASIC18.23■□□□□ 0.51
PTPN1P18031 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.23■□□□□ 0.51
PTPN1P18031 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN1P18031 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.23■□□□□ 0.51
PTPN1P18031 AC140113.2-201ENST00000604370 208 ntBASIC18.23■□□□□ 0.51
PTPN1P18031 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN1P18031 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PTPN1P18031 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN1P18031 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN1P18031 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.23■□□□□ 0.51
PTPN1P18031 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.23■□□□□ 0.51
PTPN1P18031 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN1P18031 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PTPN1P18031 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN1P18031 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN1P18031 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN1P18031 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.22■□□□□ 0.51
PTPN1P18031 MRPL20P1-201ENST00000400819 433 ntBASIC18.22■□□□□ 0.51
PTPN1P18031 CRYGEP-201ENST00000412192 528 ntBASIC18.22■□□□□ 0.51
PTPN1P18031 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN1P18031 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN1P18031 AC007967.2-201ENST00000432613 625 ntBASIC18.22■□□□□ 0.51
PTPN1P18031 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN1P18031 PRSS29P-201ENST00000440800 595 ntBASIC18.22■□□□□ 0.51
PTPN1P18031 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.22■□□□□ 0.51
PTPN1P18031 POLD2P1-201ENST00000511220 997 ntBASIC18.22■□□□□ 0.51
PTPN1P18031 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN1P18031 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN1P18031 MIR4751-201ENST00000578027 74 ntBASIC18.22■□□□□ 0.51
PTPN1P18031 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN1P18031 FAM197Y3-203ENST00000618346 717 ntBASIC18.22■□□□□ 0.51
PTPN1P18031 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.22■□□□□ 0.51
PTPN1P18031 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN1P18031 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.22■□□□□ 0.51
PTPN1P18031 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN1P18031 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN1P18031 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN1P18031 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN1P18031 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN1P18031 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PTPN1P18031 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PTPN1P18031 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.22■□□□□ 0.51
PTPN1P18031 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN1P18031 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN1P18031 EGFEM1P-202ENST00000431685 1563 ntBASIC18.21■□□□□ 0.51
PTPN1P18031 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN1P18031 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.21■□□□□ 0.51
PTPN1P18031 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN1P18031 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.21■□□□□ 0.51
PTPN1P18031 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN1P18031 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PTPN1P18031 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN1P18031 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN1P18031 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN1P18031 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.21■□□□□ 0.51
PTPN1P18031 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN1P18031 MED15P5-201ENST00000423150 992 ntBASIC18.21■□□□□ 0.51
PTPN1P18031 VN2R19P-201ENST00000442399 1052 ntBASIC18.21■□□□□ 0.51
PTPN1P18031 AL591424.1-201ENST00000442569 1213 ntBASIC18.21■□□□□ 0.51
PTPN1P18031 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.21■□□□□ 0.51
PTPN1P18031 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.21■□□□□ 0.51
PTPN1P18031 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
PTPN1P18031 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN1P18031 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN1P18031 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN1P18031 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN1P18031 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.2■□□□□ 0.5
PTPN1P18031 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.2■□□□□ 0.5
PTPN1P18031 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN1P18031 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN1P18031 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN1P18031 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.2■□□□□ 0.5
PTPN1P18031 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PTPN1P18031 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN1P18031 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN1P18031 AC141586.5-201ENST00000624546 2050 ntBASIC18.2■□□□□ 0.5
PTPN1P18031 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.2■□□□□ 0.5
PTPN1P18031 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN1P18031 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN1P18031 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
PTPN1P18031 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN1P18031 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PTPN1P18031 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.2■□□□□ 0.5
PTPN1P18031 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.2■□□□□ 0.5
PTPN1P18031 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN1P18031 KRT18P3-201ENST00000451602 1288 ntBASIC18.2■□□□□ 0.5
PTPN1P18031 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.2■□□□□ 0.5
PTPN1P18031 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.2■□□□□ 0.5
PTPN1P18031 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.2■□□□□ 0.5
PTPN1P18031 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms